The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides39887 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides39888 | REVERSE TRANSCRIPTASES |
Paelopatides39889 | NUP107-RELATED |
Paelopatides39890 | CYTOCHROME P450 26 |
Paelopatides39891 | URACIL-DNA GLYCOSYLASE |
Paelopatides39892 | EXPRESSED PROTEIN |
Paelopatides39893 | PROTEIN CBG26694 |
Paelopatides39894 | PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 |
Paelopatides39895 | TETRATRICOPEPTIDE REPEAT PROTEIN 31 |
Paelopatides39896 | |
Paelopatides39897 | |
Paelopatides39898 | EPOXIDE HYDROLASE |
Paelopatides39899 | CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX15 |
Paelopatides39900 | |
Paelopatides39901 | PANTOTHENATE KINASE |
Paelopatides39902 | MAJOR VAULT PROTEIN |
Paelopatides39903 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides39904 | MAJOR VAULT PROTEIN |
Paelopatides39905 | MRNA EXPORT FACTOR AND BUB3 |
Paelopatides39906 | |
Paelopatides39907 | BEN DOMAIN-CONTAINING PROTEIN 5 |
Paelopatides39908 | NUCLEOPORIN |
Paelopatides39909 | |
Paelopatides39910 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides39911 | |
Paelopatides39912 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides39913 | |
Paelopatides39914 | RETROTRANSPOSON |
Paelopatides39915 | RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN |
Paelopatides39916 | |
Paelopatides39917 | CELL DIVISION PROTEIN KINASE |
Paelopatides39918 | T CELL-SPECIFIC ADAPTER PROTEIN TSAD |
Paelopatides39919 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
Paelopatides39920 | GLYCOSYLTRANSFERASE |
Paelopatides39921 | LEUCINE CARBOXYL METHYLTRANSFERASE |
Paelopatides39922 | |
Paelopatides39923 | |
Paelopatides39924 | |
Paelopatides39925 | TANDEM PH DOMAIN CONTAINING PROTEIN |
Paelopatides39926 | MYND-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides39927 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides39928 | DUF3504 DOMAIN-CONTAINING PROTEIN |
Paelopatides39929 | SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7 |
Paelopatides39930 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides39931 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Paelopatides39932 | SHORT-CHAIN DEHYDROGENASE/REDUCTASE |
Paelopatides39933 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED |
Paelopatides39934 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides39935 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
Paelopatides39936 | PROTEIN CBG26694 |