The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides39784 | |
| Paelopatides39785 | C10ORF188 FAMILY MEMBER |
| Paelopatides39786 | |
| Paelopatides39787 | DYNEIN INTERMEDIATE CHAIN |
| Paelopatides39788 | MYOTUBULARIN-RELATED |
| Paelopatides39789 | ANKYRIN DOMAIN-CONTAINING |
| Paelopatides39790 | ANKYRIN REPEAT FAMILY PROTEIN |
| Paelopatides39791 | - |
| Paelopatides39792 | NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING |
| Paelopatides39793 | PROTEIN CBG26694 |
| Paelopatides39794 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides39795 | NG5 |
| Paelopatides39796 | |
| Paelopatides39797 | |
| Paelopatides39799 | |
| Paelopatides39800 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides39801 | |
| Paelopatides39802 | FI04643P-RELATED |
| Paelopatides39803 | |
| Paelopatides39804 | |
| Paelopatides39805 | ZGC:195170 |
| Paelopatides39806 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides39807 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides39808 | GLYCOSYLTRANSFERASE-RELATED |
| Paelopatides39809 | CHARGED MULTIVESICULAR BODY PROTEIN |
| Paelopatides39810 | CHARGED MULTIVESICULAR BODY PROTEIN |
| Paelopatides39811 | |
| Paelopatides39812 | FANCONI ANEMIA CORE COMPLEX-ASSOCIATED PROTEIN 24 |
| Paelopatides39813 | DOLICHOL-PHOSPHATE MANNOSYLTRANSFERASE SUBUNIT 1 |
| Paelopatides39814 | PROTEIN CBG26694 |
| Paelopatides39815 | PROTEIN CBG26694 |
| Paelopatides39816 | LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED |
| Paelopatides39817 | LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED |
| Paelopatides39818 | |
| Paelopatides39820 | |
| Paelopatides39821 | OVOCHYMASE-RELATED |
| Paelopatides39823 | LONG-CHAIN FATTY ACID TRANSPORT PROTEIN |
| Paelopatides39824 | SEPTIN |
| Paelopatides39825 | BOLA-LIKE PROTEIN-RELATED |
| Paelopatides39826 | |
| Paelopatides39827 | |
| Paelopatides39828 | |
| Paelopatides39829 | |
| Paelopatides39830 | |
| Paelopatides39831 | |
| Paelopatides39832 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides39833 | |
| Paelopatides39834 | T-BOX PROTEIN-RELATED |
| Paelopatides39835 | |
| Paelopatides39836 |
