The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides39473 | |
| Paelopatides39474 | XANTHINE DEHYDROGENASE |
| Paelopatides39475 | CLASP |
| Paelopatides39476 | |
| Paelopatides39477 | DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN |
| Paelopatides39478 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| Paelopatides39479 | CLASP |
| Paelopatides39480 | UPF0692 PROTEIN C19ORF54 |
| Paelopatides39481 | PINN |
| Paelopatides39482 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| Paelopatides39483 | |
| Paelopatides39484 | REVERSE TRANSCRIPTASE |
| Paelopatides39485 | TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides39486 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides39487 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides39488 | GTP-BINDING |
| Paelopatides39489 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides39490 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides39491 | |
| Paelopatides39492 | FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD |
| Paelopatides39495 | |
| Paelopatides39496 | - |
| Paelopatides39497 | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE |
| Paelopatides39498 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| Paelopatides39499 | RETROTRANSPOSON |
| Paelopatides39500 | APOPTOTIC CHROMATIN CONDENSATION INDUCER IN THE NUCLEUS |
| Paelopatides39501 | |
| Paelopatides39502 | CENTROSOMAL PROTEIN OF 89 KDA |
| Paelopatides39503 | CENTROSOMAL PROTEIN OF 89 KDA |
| Paelopatides39504 | |
| Paelopatides39505 | |
| Paelopatides39506 | |
| Paelopatides39507 | |
| Paelopatides39508 | ENGULFMENT AND CELL MOTILITY |
| Paelopatides39509 | - |
| Paelopatides39510 | - |
| Paelopatides39511 | |
| Paelopatides39512 | PROTEIN CBG26694 |
| Paelopatides39513 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
| Paelopatides39514 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides39515 | TYROSINE-PROTEIN KINASE RECEPTOR |
| Paelopatides39516 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides39517 | CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN |
| Paelopatides39518 | NETRIN RECEPTOR UNC5 |
| Paelopatides39519 | |
| Paelopatides39520 | |
| Paelopatides39521 | |
| Paelopatides39522 | |
| Paelopatides39523 | |
| Paelopatides39524 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
