The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides39423 | |
Paelopatides39424 | PHOSPHOLIPASE A2 FAMILY MEMBER |
Paelopatides39425 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
Paelopatides39426 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides39427 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides39428 | BUCENTAUR RELATED |
Paelopatides39429 | |
Paelopatides39430 | |
Paelopatides39431 | |
Paelopatides39432 | |
Paelopatides39433 | FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD |
Paelopatides39434 | |
Paelopatides39435 | NACHT DOMAIN-CONTAINING PROTEIN |
Paelopatides39436 | FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD |
Paelopatides39437 | IP13529P |
Paelopatides39438 | SI:CH211-196P9.1-RELATED |
Paelopatides39439 | STEROL DESATURASE |
Paelopatides39440 | PROTEIN, PUTATIVE-RELATED |
Paelopatides39441 | POTE ANKYRIN DOMAIN |
Paelopatides39442 | NA+/CA2+ K+ INDEPENDENT EXCHANGER |
Paelopatides39443 | CS DOMAIN-CONTAINING PROTEIN |
Paelopatides39444 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
Paelopatides39445 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides39446 | |
Paelopatides39447 | SERINE/THREONINE-PROTEIN KINASE |
Paelopatides39448 | NOTCH LIGAND FAMILY MEMBER |
Paelopatides39449 | NOTCH LIGAND FAMILY MEMBER |
Paelopatides39450 | BITESIZE, ISOFORM I |
Paelopatides39451 | DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER |
Paelopatides39452 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
Paelopatides39453 | GTP-BINDING |
Paelopatides39454 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides39455 | |
Paelopatides39456 | TRANSPOSABLE ELEMENT-RELATED |
Paelopatides39457 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides39458 | PR DOMAIN ZINC FINGER PROTEIN |
Paelopatides39459 | OCTANOYLTRANSFERASE |
Paelopatides39460 | OCTANOYLTRANSFERASE |
Paelopatides39461 | |
Paelopatides39462 | |
Paelopatides39463 | GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED |
Paelopatides39464 | |
Paelopatides39465 | |
Paelopatides39466 | 5-HYDROXYTRYPTAMINE RECEPTOR |
Paelopatides39467 | UNCHARACTERIZED |
Paelopatides39468 | 39S RIBOSOMAL PROTEIN L55, MITOCHONDRIAL |
Paelopatides39469 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Paelopatides39470 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides39471 | RETROTRANSPOSON |
Paelopatides39472 |