The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides39157 | |
| Paelopatides39158 | CGI-141-RELATED/LIPASE CONTAINING PROTEIN |
| Paelopatides39159 | FI18025P1 |
| Paelopatides39160 | CASEIN KINASE II SUBUNIT ALPHA |
| Paelopatides39161 | 1,4-ALPHA-GLUCAN-BRANCHING ENZYME |
| Paelopatides39162 | - |
| Paelopatides39163 | |
| Paelopatides39164 | N-ACETYLTRANSFERASE 6 |
| Paelopatides39165 | |
| Paelopatides39166 | ENDONUCLEASE-RELATED |
| Paelopatides39167 | POL PROTEIN |
| Paelopatides39168 | |
| Paelopatides39169 | PROTEIN CBG26694 |
| Paelopatides39170 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| Paelopatides39171 | |
| Paelopatides39172 | 60S RIBOSOMAL PROTEIN L21 |
| Paelopatides39173 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides39174 | TAX1-BINDING PROTEIN 3-RELATED |
| Paelopatides39175 | |
| Paelopatides39176 | EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 12 |
| Paelopatides39177 | |
| Paelopatides39178 | TRNA (GUANINE-9-) METHYLTRANSFERASE |
| Paelopatides39179 | BICAUDAL D FAMILY MEMBER |
| Paelopatides39180 | N-TERMINAL ACETYLTRANSFERASE |
| Paelopatides39181 | |
| Paelopatides39182 | HOMEOBOX PROTEIN NKX |
| Paelopatides39183 | SKELETOR-RELATED |
| Paelopatides39184 | SKELETOR-RELATED |
| Paelopatides39185 | SKELETOR-RELATED |
| Paelopatides39186 | |
| Paelopatides39187 | N-ACETYLNEURAMINATE SYNTHASE |
| Paelopatides39188 | |
| Paelopatides39189 | LORICRIN |
| Paelopatides39190 | |
| Paelopatides39191 | DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN |
| Paelopatides39192 | UNCHARACTERIZED |
| Paelopatides39193 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| Paelopatides39194 | |
| Paelopatides39195 | ENZYMATIC POLYPROTEIN-RELATED |
| Paelopatides39196 | PROTEIN CBG26694 |
| Paelopatides39197 | TYROSINE-PROTEIN KINASE RECEPTOR |
| Paelopatides39198 | |
| Paelopatides39199 | IMPORTIN BETA |
| Paelopatides39200 | TRANSLATION INITIATION FACTOR IF-2-RELATED |
| Paelopatides39205 | POL PROTEIN |
| Paelopatides39206 | PARANEOPLASTIC ANTIGEN |
| Paelopatides39207 | |
| Paelopatides39208 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| Paelopatides39209 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides39210 | PROTEIN CBG26694 |
