The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides39055 | |
Paelopatides39056 | BUCENTAUR RELATED |
Paelopatides39057 | |
Paelopatides39058 | ZINC FINGER, C3HC4 TYPE (RING FINGER) FAMILY PROTEIN |
Paelopatides39059 | |
Paelopatides39060 | ZINC FINGER, C3HC4 TYPE (RING FINGER) FAMILY PROTEIN |
Paelopatides39061 | |
Paelopatides39062 | |
Paelopatides39063 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Paelopatides39064 | UNCHARACTERIZED |
Paelopatides39066 | PROTEIN CBG26694 |
Paelopatides39067 | SULFATE TRANSPORTER |
Paelopatides39068 | SULFATE TRANSPORTER |
Paelopatides39069 | |
Paelopatides39070 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides39071 | ACTIN |
Paelopatides39072 | ACTIN |
Paelopatides39073 | DOUBLESEX AND MAB-3 RELATED TRANSCRIPTION FACTOR DMRT |
Paelopatides39074 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Paelopatides39075 | |
Paelopatides39076 | ACTIN |
Paelopatides39077 | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER |
Paelopatides39078 | TRANSMEMBRANE PROTEIN ADIPOCYTE-ASSOCIATED 1 |
Paelopatides39079 | - |
Paelopatides39080 | |
Paelopatides39081 | PROTEIN CBG26694 |
Paelopatides39082 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
Paelopatides39083 | PROTEIN CBG26694 |
Paelopatides39084 | POL PROTEIN |
Paelopatides39085 | |
Paelopatides39086 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides39087 | |
Paelopatides39088 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides39089 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides39090 | TRANSALDOLASE |
Paelopatides39091 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides39092 | |
Paelopatides39093 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides39094 | |
Paelopatides39095 | BETA-MANNOSIDASE |
Paelopatides39097 | GLUCOCORTICOID MODULATORY ELEMENT-BINDING PROTEIN |
Paelopatides39098 | |
Paelopatides39099 | NUCLEOLAR COMPLEX 2 AND RAD4-RELATED |
Paelopatides39100 | NUCLEOLAR COMPLEX 2 AND RAD4-RELATED |
Paelopatides39101 | DNAJ HOMOLOG SUBFAMILY C MEMBER 10 |
Paelopatides39102 | |
Paelopatides39103 | |
Paelopatides39104 | BUCENTAUR RELATED |
Paelopatides39105 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides39106 | MUCIN 4-RELATED |