The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides39001 | SH2-SH3 ADAPTOR PROTEIN-RELATED |
Paelopatides39002 | UNCHARACTERIZED |
Paelopatides39003 | |
Paelopatides39004 | |
Paelopatides39005 | POL PROTEIN |
Paelopatides39006 | |
Paelopatides39007 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides39008 | |
Paelopatides39009 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides39010 | TRANSMEMBRANE PROTEIN |
Paelopatides39011 | PROTEIN CBG26694 |
Paelopatides39012 | |
Paelopatides39013 | |
Paelopatides39014 | KERATIN ASSOCIATED PROTEIN 3-3-RELATED |
Paelopatides39015 | BASIGIN RELATED |
Paelopatides39016 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides39017 | L1 TRANSPOSABLE ELEMENT-RELATED |
Paelopatides39018 | PROTEIN SIDEKICK |
Paelopatides39019 | PROTEIN SIDEKICK |
Paelopatides39020 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Paelopatides39021 | |
Paelopatides39022 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides39023 | BONUS, ISOFORM C-RELATED |
Paelopatides39024 | |
Paelopatides39025 | |
Paelopatides39026 | SULFOTRANSFERASE SULT |
Paelopatides39027 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides39028 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides39029 | IP13529P |
Paelopatides39030 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides39034 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
Paelopatides39035 | PROTEIN CBG26694 |
Paelopatides39036 | PROTEIN CBG26694 |
Paelopatides39037 | FI04643P-RELATED |
Paelopatides39038 | |
Paelopatides39039 | RETROTRANSPOSON |
Paelopatides39040 | RETROTRANSPOSON |
Paelopatides39041 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides39042 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides39043 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides39044 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides39045 | PROTEIN CBG26694 |
Paelopatides39046 | PROTEIN CBG26694 |
Paelopatides39047 | PROTEIN CBG26694 |
Paelopatides39048 | POL PROTEIN |
Paelopatides39050 | |
Paelopatides39051 | MUCIN 4-RELATED |
Paelopatides39052 | |
Paelopatides39053 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Paelopatides39054 |