The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides38848 | |
| Paelopatides38849 | |
| Paelopatides38850 | |
| Paelopatides38851 | |
| Paelopatides38852 | SRCR DOMAIN-CONTAINING PROTEIN |
| Paelopatides38853 | DED DOMAIN-CONTAINING PROTEIN |
| Paelopatides38854 | |
| Paelopatides38855 | |
| Paelopatides38856 | |
| Paelopatides38857 | REVERSE TRANSCRIPTASES |
| Paelopatides38858 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides38859 | |
| Paelopatides38860 | |
| Paelopatides38861 | O-METHYLTRANSFERASE-RELATED |
| Paelopatides38862 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides38863 | |
| Paelopatides38864 | TRANSMEMBRANE PROTEIN 101 |
| Paelopatides38865 | SERINE/THREONINE-PROTEIN KINASE |
| Paelopatides38866 | |
| Paelopatides38867 | ALDEHYDE DEHYDROGENASE |
| Paelopatides38868 | MACROGLOBULIN / COMPLEMENT |
| Paelopatides38869 | MACROGLOBULIN / COMPLEMENT |
| Paelopatides38870 | MACROGLOBULIN / COMPLEMENT |
| Paelopatides38871 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
| Paelopatides38872 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides38873 | IRON-SULFUR PROTEIN NUBPL |
| Paelopatides38874 | |
| Paelopatides38875 | NEUTROPHIL CYTOSOLIC FACTOR 2, NEUTROPHIL NADPH OXIDASE FACTOR 2 |
| Paelopatides38876 | NEUTROPHIL CYTOSOLIC FACTOR 2, NEUTROPHIL NADPH OXIDASE FACTOR 2 |
| Paelopatides38877 | |
| Paelopatides38878 | CYTOCHROME C1 HEME LYASE |
| Paelopatides38879 | SMALL INTEGRAL MEMBRANE PROTEIN 15 |
| Paelopatides38880 | ADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX ASSEMBLY FACTOR 2 |
| Paelopatides38881 | RNA 3' TERMINAL PHOSPHATE CYCLASE |
| Paelopatides38882 | EG:EG0003.4 PROTEIN-RELATED |
| Paelopatides38883 | T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN |
| Paelopatides38884 | RAB6A-GEF COMPLEX PARTNER PROTEIN 1 |
| Paelopatides38885 | RAB6A-GEF COMPLEX PARTNER PROTEIN 1 |
| Paelopatides38886 | |
| Paelopatides38887 | RING FINGER PROTEIN 31-RELATED |
| Paelopatides38888 | |
| Paelopatides38889 | ANKYRIN REPEAT-CONTAINING |
| Paelopatides38890 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides38891 | |
| Paelopatides38892 | ENDONUCLEASE-RELATED |
| Paelopatides38893 | PROTEIN CBG26694 |
| Paelopatides38894 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides38895 | SOLUTE CARRIER FAMILY 22 MEMBER |
| Paelopatides38896 | |
| Paelopatides38897 | HEMOPEXIN DOMAIN-CONTAINING PROTEIN |
