About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633 Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides38949ENZYMATIC POLYPROTEIN-RELATED
Paelopatides38950PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides38951SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides38952FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides38953
Paelopatides38954
Paelopatides38955DNA POLYMERASE I
Paelopatides38956KINESIN-LIKE PROTEIN KLP-3
Paelopatides38958MALE FERTILITY FACTOR KL5
Paelopatides38959
Paelopatides38960ATP SYNTHASE DELTA CHAIN
Paelopatides38961RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR AT 64C, ISOFORM A
Paelopatides38962EH DOMAIN
Paelopatides38963MITOCHONDRIAL RIBOSOMAL PROTEIN S31
Paelopatides38964COILED-COIL DOMAIN-CONTAINING PROTEIN 58
Paelopatides38965IMPORTIN ALPHA
Paelopatides38966GROWTH AND TRANSFORMATION-DEPENDENT PROTEIN
Paelopatides38967UPF0041 BRAIN PROTEIN 44-RELATED
Paelopatides38968NADPH OXIDASE
Paelopatides38969DNA HELICASE RECQ FAMILY MEMBER
Paelopatides38970CYCLIC NUCLEOTIDE PHOSPHODIESTERASE
Paelopatides38971XPA-BINDING PROTEIN 1-RELATED
Paelopatides38972KNIRPS-RELATED PROTEIN-RELATED
Paelopatides38973
Paelopatides38974UNCHARACTERIZED
Paelopatides38975SI:CH211-196P9.1-RELATED
Paelopatides38976TETRASPANIN
Paelopatides38977
Paelopatides38978SERUM RESPONSE FACTOR HOMOLOG
Paelopatides38979RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING
Paelopatides38980MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM44
Paelopatides38981MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM44
Paelopatides38982
Paelopatides38983ZGC:101016
Paelopatides38984PROTEIN CBG26694
Paelopatides38985PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides38986NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED
Paelopatides38987
Paelopatides38988COILED-COIL DOMAIN-CONTAINING PROTEIN 180
Paelopatides38989NEUROPEPTIDES RECEPTOR
Paelopatides38990
Paelopatides38992CARBOHYDRATE SULFOTRANSFERASE 15
Paelopatides38993RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATED
Paelopatides38994
Paelopatides38995CALCIUM-BINDING PROTEIN 39-RELATED
Paelopatides38996ADP-RIBOSYL CYCLASE
Paelopatides38997
Paelopatides38998SH2-SH3 ADAPTOR PROTEIN-RELATED
Paelopatides38999SH2-SH3 ADAPTOR PROTEIN-RELATED
Paelopatides39000
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