The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides38644 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides38645 | |
| Paelopatides38646 | BUCENTAUR RELATED |
| Paelopatides38647 | |
| Paelopatides38648 | |
| Paelopatides38649 | ZGC:195170 |
| Paelopatides38650 | RETICULOCALBIN |
| Paelopatides38651 | PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED |
| Paelopatides38652 | |
| Paelopatides38653 | SERINE/THREONINE-PROTEIN PHOSPHATASE 2B CATALYTIC SUBUNIT 1-RELATED |
| Paelopatides38654 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides38655 | SERINE/THREONINE-PROTEIN PHOSPHATASE 2B CATALYTIC SUBUNIT 1-RELATED |
| Paelopatides38656 | SERINE/THREONINE-PROTEIN PHOSPHATASE 2B CATALYTIC SUBUNIT 1-RELATED |
| Paelopatides38657 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| Paelopatides38658 | |
| Paelopatides38659 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| Paelopatides38660 | MITOGEN-ACTIVATED PROTEIN KINASE |
| Paelopatides38661 | SPERMATHECAL PHYSIOLOGY VARIANT |
| Paelopatides38662 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides38663 | |
| Paelopatides38664 | |
| Paelopatides38667 | |
| Paelopatides38668 | FARNESYL-PYROPHOSPHATE SYNTHETASE |
| Paelopatides38669 | MICRO-RNA BINDING ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 7 |
| Paelopatides38670 | N 2 ,N 2 -DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE |
| Paelopatides38671 | ENDONUCLEASE |
| Paelopatides38672 | |
| Paelopatides38673 | |
| Paelopatides38674 | |
| Paelopatides38675 | YIPPEE DOMAIN-CONTAINING PROTEIN |
| Paelopatides38676 | |
| Paelopatides38677 | |
| Paelopatides38678 | CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN |
| Paelopatides38679 | |
| Paelopatides38680 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides38681 | GABA-B RECEPTOR |
| Paelopatides38682 | TUBERIN |
| Paelopatides38683 | RETROTRANSPOSON |
| Paelopatides38684 | |
| Paelopatides38685 | ZGC:174356 |
| Paelopatides38686 | INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN-RELATED |
| Paelopatides38687 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides38688 | CYSTEINE-RICH MOTOR NEURON 1 PROTEIN |
| Paelopatides38689 | |
| Paelopatides38690 | ACTIN |
| Paelopatides38691 | REVERSE TRANSCRIPTASES |
| Paelopatides38692 | |
| Paelopatides38693 | SERINE/THREONINE-PROTEIN KINASE RIO1 |
| Paelopatides38694 | CYTOSINE DEAMINASE FAMILY MEMBER |
| Paelopatides38695 |
