The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides38387 | E3 UBIQUITIN-PROTEIN LIGASE SHPRH FAMILY MEMBER |
| Paelopatides38388 | TRANSAMIDASE |
| Paelopatides38389 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
| Paelopatides38390 | OTU DOMAIN CONTAINING PROTEIN |
| Paelopatides38391 | - |
| Paelopatides38392 | |
| Paelopatides38393 | PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT |
| Paelopatides38394 | CORE-BINDING FACTOR, BETA SUBUNIT |
| Paelopatides38395 | SSM4 PROTEIN |
| Paelopatides38396 | REGULATOR OF MICROTUBULE DYNAMICS PROTEIN |
| Paelopatides38397 | ATAXIN 1 |
| Paelopatides38398 | TUMOR PROTEIN P63-REGULATED GENE 1-LIKE PROTEIN |
| Paelopatides38399 | |
| Paelopatides38400 | |
| Paelopatides38401 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
| Paelopatides38402 | ZGC:195170 |
| Paelopatides38403 | LYSINE-SPECIFIC DEMETHYLASE |
| Paelopatides38404 | TF-1 CELL APOPTOSIS RELATED PROTEIN-15 |
| Paelopatides38405 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| Paelopatides38406 | RHOMBOID-RELATED PROTEIN |
| Paelopatides38407 | |
| Paelopatides38408 | |
| Paelopatides38409 | |
| Paelopatides38410 | |
| Paelopatides38411 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
| Paelopatides38412 | |
| Paelopatides38413 | ENDONUCLEASE-RELATED |
| Paelopatides38414 | SMAD |
| Paelopatides38415 | SMAD |
| Paelopatides38416 | PEPTIDASE |
| Paelopatides38417 | SMAD |
| Paelopatides38418 | |
| Paelopatides38419 | FIBRILLIN-RELATED |
| Paelopatides38420 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides38421 | MUCIN 4-RELATED |
| Paelopatides38422 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED |
| Paelopatides38423 | REPETIN |
| Paelopatides38424 | |
| Paelopatides38425 | |
| Paelopatides38426 | |
| Paelopatides38427 | |
| Paelopatides38428 | |
| Paelopatides38429 | DEOXYRIBONUCLEASE |
| Paelopatides38430 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides38431 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides38432 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides38433 | SOLUTE CARRIER FAMILY 2 |
| Paelopatides38434 | PROTEIN BARK BEETLE |
| Paelopatides38435 | |
| Paelopatides38436 |
