The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides38134 | FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD |
| Paelopatides38135 | |
| Paelopatides38136 | |
| Paelopatides38137 | BCAS2 PROTEIN |
| Paelopatides38138 | LD33804P |
| Paelopatides38139 | JITTERBUG, ISOFORM N |
| Paelopatides38140 | JITTERBUG, ISOFORM N |
| Paelopatides38141 | RIBOSOME BIOGENESIS PROTEIN |
| Paelopatides38142 | |
| Paelopatides38143 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides38144 | RIBOSOME BIOGENESIS PROTEIN |
| Paelopatides38145 | |
| Paelopatides38146 | |
| Paelopatides38147 | ALDEHYDE DEHYDROGENASE-RELATED |
| Paelopatides38148 | N-FATTY-ACYL-AMINO ACID SYNTHASE/HYDROLASE PM20D1 |
| Paelopatides38149 | |
| Paelopatides38150 | |
| Paelopatides38151 | PROTEIN CBG26694 |
| Paelopatides38152 | NETRIN/LAMININ-RELATED |
| Paelopatides38153 | EARLY GAMETOCYTE ENRICHED PHOSPHOPROTEIN EGXP |
| Paelopatides38154 | DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER |
| Paelopatides38155 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides38156 | PROTEIN CBG26694 |
| Paelopatides38157 | MARVEL-CONTAINING POTENTIAL LIPID RAFT-ASSOCIATED PROTEIN |
| Paelopatides38158 | PEPTIDASE |
| Paelopatides38159 | FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides38160 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides38161 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides38162 | |
| Paelopatides38163 | PROTEIN CBG26694 |
| Paelopatides38164 | PROTEIN CBG26694 |
| Paelopatides38165 | |
| Paelopatides38166 | TRANSPOSASE, PUTATIVE-RELATED |
| Paelopatides38167 | INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides38168 | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7 |
| Paelopatides38169 | INTRAFLAGELLAR TRANSPORT PROTEIN 88 HOMOLOG |
| Paelopatides38170 | PROTEIN CMSS1 |
| Paelopatides38171 | METHYLTRANSFERASE |
| Paelopatides38172 | ARGININE/SERINE-RICH PROTEIN PNISR |
| Paelopatides38173 | UNCHARACTERIZED |
| Paelopatides38174 | TAXILIN |
| Paelopatides38175 | |
| Paelopatides38176 | SMITH-MAGENIS SYNDROME REGION GENE 8 PROTEIN |
| Paelopatides38177 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| Paelopatides38178 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
| Paelopatides38179 | |
| Paelopatides38180 | CRSP70 |
| Paelopatides38181 | CRSP70 |
| Paelopatides38182 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides38183 | E3 UBIQUITIN-PROTEIN LIGASE KCMF1 |
