The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides37971 | |
Paelopatides37974 | ADP RIBOSYLATION FACTOR-RELATED |
Paelopatides37975 | |
Paelopatides37976 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides37977 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides37978 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides37979 | PROTEIN CBG26694 |
Paelopatides37980 | NUCLEOLAR COMPLEX PROTEIN 3 |
Paelopatides37981 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides37982 | |
Paelopatides37983 | POL PROTEIN |
Paelopatides37984 | |
Paelopatides37985 | SI:CH211-196P9.1-RELATED |
Paelopatides37986 | DEOXYRIBONUCLEASE II |
Paelopatides37987 | ATP-BINDING CASSETTE SUB-FAMILY B |
Paelopatides37988 | ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE |
Paelopatides37989 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides37990 | - |
Paelopatides37991 | |
Paelopatides37992 | TUBULIN |
Paelopatides37993 | PROTEIN CBG26694 |
Paelopatides37994 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides37995 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides37996 | SRCR DOMAIN-CONTAINING PROTEIN |
Paelopatides37997 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
Paelopatides37998 | PROTEIN PHOSPHATASE 2C |
Paelopatides37999 | PROTEIN PHOSPHATASE 2C |
Paelopatides38000 | BONUS, ISOFORM C-RELATED |
Paelopatides38001 | POL PROTEIN |
Paelopatides38002 | ENDONUCLEASE |
Paelopatides38003 | BONUS, ISOFORM C-RELATED |
Paelopatides38004 | BONUS, ISOFORM C-RELATED |
Paelopatides38005 | |
Paelopatides38006 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides38007 | |
Paelopatides38016 | |
Paelopatides38017 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides38018 | MUTT/NUDIX HYDROLASE |
Paelopatides38019 | |
Paelopatides38020 | |
Paelopatides38021 | RIBONUCLEASE P PROTEIN SUBUNIT P14 |
Paelopatides38022 | CYCLIN |
Paelopatides38023 | WD REPEAT-CONTAINING PROTEIN 55 |
Paelopatides38024 | - |
Paelopatides38025 | GDP-D-GLUCOSE PHOSPHORYLASE 1 |
Paelopatides38026 | BRISC AND BRCA1-A COMPLEX MEMBER 2 |
Paelopatides38027 | |
Paelopatides38028 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides38029 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides38030 | CATION-TRANSPORTING ATPASE-RELATED |