The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides37709 | HEMOPEXIN DOMAIN-CONTAINING PROTEIN |
| Paelopatides37710 | |
| Paelopatides37711 | |
| Paelopatides37714 | |
| Paelopatides37715 | |
| Paelopatides37716 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides37717 | B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR |
| Paelopatides37718 | |
| Paelopatides37719 | |
| Paelopatides37720 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides37722 | GALACTOSE-3-O-SULFOTRANSFERASE |
| Paelopatides37723 | |
| Paelopatides37724 | |
| Paelopatides37725 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides37726 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides37727 | BUCENTAUR RELATED |
| Paelopatides37728 | PROTEIN, PUTATIVE-RELATED |
| Paelopatides37729 | CYTOCHROME P450 FAMILY 3 |
| Paelopatides37730 | |
| Paelopatides37731 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides37732 | UNCHARACTERIZED |
| Paelopatides37733 | |
| Paelopatides37734 | CENTROSOME SPINDLE POLE ASSOCIATED PROTEIN |
| Paelopatides37735 | SHC TRANSFORMING PROTEIN |
| Paelopatides37736 | WAP FOUR-DISULFIDE CORE DOMAIN PROTEIN 1 |
| Paelopatides37737 | DNA HELICASE RECQ FAMILY MEMBER |
| Paelopatides37738 | MULTICOPPER OXIDASE-RELATED |
| Paelopatides37739 | |
| Paelopatides37740 | INTERFERON-INDUCED PROTEIN WITH TETRATRICOPEPTIDE REPEATS |
| Paelopatides37741 | KICSTOR COMPLEX PROTEIN SZT2 |
| Paelopatides37742 | G PATCH DOMAIN-CONTAINING PROTEIN 1 |
| Paelopatides37743 | SI:CH211-175M2.5 |
| Paelopatides37744 | SARCOMA ANTIGEN NY-SAR-23 |
| Paelopatides37745 | COILED-COIL DOMAIN-CONTAINING PROTEIN 125 |
| Paelopatides37746 | CONDENSIN COMPLEX SUBUNIT 3-RELATED |
| Paelopatides37747 | CONDENSIN COMPLEX SUBUNIT 3-RELATED |
| Paelopatides37748 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 99 |
| Paelopatides37749 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides37750 | COMPLEXIN |
| Paelopatides37751 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| Paelopatides37752 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides37753 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides37754 | UNCHARACTERIZED |
| Paelopatides37755 | - |
| Paelopatides37756 | |
| Paelopatides37757 | |
| Paelopatides37758 | DIMETHYLANILINE MONOOXYGENASE |
| Paelopatides37759 | |
| Paelopatides37760 | ENDONUCLEASE-RELATED |
| Paelopatides37761 | ENZYMATIC POLYPROTEIN-RELATED |
