The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides37863 | |
| Paelopatides37864 | |
| Paelopatides37865 | |
| Paelopatides37866 | |
| Paelopatides37867 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
| Paelopatides37868 | PROTEIN CBG26694 |
| Paelopatides37869 | PROTEIN CBG26694 |
| Paelopatides37870 | IP13529P |
| Paelopatides37871 | SYNAPTIC VESICLE GLYCOPROTEIN 2 |
| Paelopatides37872 | GTP-BINDING |
| Paelopatides37873 | |
| Paelopatides37874 | |
| Paelopatides37875 | GTP-BINDING |
| Paelopatides37876 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
| Paelopatides37877 | |
| Paelopatides37878 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 24 |
| Paelopatides37879 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 24 |
| Paelopatides37880 | SERINE/THREONINE-PROTEIN KINASE 16 |
| Paelopatides37881 | SERINE/THREONINE-PROTEIN KINASE 16 |
| Paelopatides37882 | |
| Paelopatides37883 | |
| Paelopatides37884 | REVERSE TRANSCRIPTASES |
| Paelopatides37885 | WD40 REPEAT PROTEINPRL1/PRL2-RELATED |
| Paelopatides37886 | PROTEIN CBG26694 |
| Paelopatides37887 | |
| Paelopatides37888 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides37889 | |
| Paelopatides37890 | |
| Paelopatides37891 | |
| Paelopatides37892 | AGAP005574-PA |
| Paelopatides37893 | NACHT DOMAIN-CONTAINING PROTEIN |
| Paelopatides37894 | |
| Paelopatides37895 | PROTEIN CBG26694 |
| Paelopatides37896 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides37897 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides37898 | |
| Paelopatides37899 | BEN DOMAIN-CONTAINING PROTEIN 5 |
| Paelopatides37900 | |
| Paelopatides37901 | BEN DOMAIN-CONTAINING PROTEIN 6 |
| Paelopatides37902 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| Paelopatides37903 | |
| Paelopatides37904 | |
| Paelopatides37905 | RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER |
| Paelopatides37906 | 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL |
| Paelopatides37907 | |
| Paelopatides37908 | SELENOPROTEIN W |
| Paelopatides37909 | CYSTATIN |
| Paelopatides37910 | |
| Paelopatides37911 | UBIQUITIN-FOLD MODIFIER-CONJUGATING ENZYME 1 |
| Paelopatides37912 | DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 |
