The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides37913 | SELENOPROTEIN S |
| Paelopatides37914 | |
| Paelopatides37915 | |
| Paelopatides37916 | NF-KAPPA-B INHIBITOR ALPHA |
| Paelopatides37917 | |
| Paelopatides37918 | |
| Paelopatides37919 | HEPARAN SULFATE 2-O-SULFOTRANSFERASE |
| Paelopatides37920 | |
| Paelopatides37921 | PROTEIN CBG26694 |
| Paelopatides37922 | |
| Paelopatides37923 | TETRASPANIN |
| Paelopatides37924 | TARSH-RELATED FIBRONECTIN DOMAIN-CONTAINING |
| Paelopatides37925 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides37926 | ZINC FINGER PROTEIN |
| Paelopatides37927 | EXPRESSED PROTEIN |
| Paelopatides37928 | |
| Paelopatides37929 | |
| Paelopatides37930 | N-ACETYLGALACTOSAMINYLTRANSFERASE |
| Paelopatides37931 | GRANULIN |
| Paelopatides37932 | |
| Paelopatides37933 | AVIDIN-RELATED |
| Paelopatides37934 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides37935 | CHASCON, ISOFORM D-RELATED |
| Paelopatides37936 | |
| Paelopatides37937 | OPSIN |
| Paelopatides37939 | ZGC:195170 |
| Paelopatides37940 | SI:CH211-108C17.2-RELATED-RELATED |
| Paelopatides37941 | |
| Paelopatides37942 | |
| Paelopatides37943 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides37944 | |
| Paelopatides37945 | REVERSE TRANSCRIPTASE |
| Paelopatides37946 | |
| Paelopatides37947 | POL PROTEIN |
| Paelopatides37948 | |
| Paelopatides37949 | |
| Paelopatides37950 | |
| Paelopatides37951 | |
| Paelopatides37956 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| Paelopatides37957 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides37958 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides37959 | IP13529P |
| Paelopatides37960 | |
| Paelopatides37964 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides37965 | KELCH PROTEIN |
| Paelopatides37966 | HEPARAN SULFATE 2-O-SULFOTRANSFERASE |
| Paelopatides37967 | METHYLTRANSFERASE-RELATED |
| Paelopatides37968 | TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE |
| Paelopatides37969 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
| Paelopatides37970 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
