The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides38082 | PROPERDIN |
Paelopatides38083 | FI04643P-RELATED |
Paelopatides38084 | |
Paelopatides38085 | - |
Paelopatides38086 | |
Paelopatides38087 | |
Paelopatides38088 | ACYL-COA DEHYDROGENASE |
Paelopatides38091 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides38092 | |
Paelopatides38093 | ELONGATION FACTOR TU-RELATED |
Paelopatides38094 | CYTOCHROME P450 FAMILY 3 |
Paelopatides38095 | |
Paelopatides38096 | |
Paelopatides38097 | NACHT DOMAIN-CONTAINING PROTEIN |
Paelopatides38098 | |
Paelopatides38099 | SLR5058 PROTEIN |
Paelopatides38100 | NETRIN RECEPTOR UNC5 |
Paelopatides38101 | |
Paelopatides38102 | |
Paelopatides38103 | |
Paelopatides38104 | G-PROTEIN COUPLED RECEPTOR FAMILY 1 MEMBER |
Paelopatides38105 | |
Paelopatides38106 | |
Paelopatides38107 | RETROTRANSPOSON |
Paelopatides38108 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides38109 | ZINC FINGER PROTEIN |
Paelopatides38110 | |
Paelopatides38111 | TETRASPANIN |
Paelopatides38112 | TETRASPANIN |
Paelopatides38113 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides38114 | - |
Paelopatides38115 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides38116 | |
Paelopatides38117 | ARYLSULFATASE FAMILY MEMBER |
Paelopatides38118 | DESTABILASE-RELATED |
Paelopatides38119 | AQUAPORIN OR AQUAGLYCEROPORIN RELATED |
Paelopatides38120 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides38121 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides38122 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides38123 | SIALATE O-ACETYLESTERASE |
Paelopatides38124 | RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN |
Paelopatides38125 | DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED |
Paelopatides38126 | PUTATIVE HOMEODOMAIN TRANSCRIPTION FACTOR PHTF |
Paelopatides38127 | |
Paelopatides38128 | |
Paelopatides38129 | |
Paelopatides38130 | PUTATIVE HOMEODOMAIN TRANSCRIPTION FACTOR PHTF |
Paelopatides38131 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
Paelopatides38132 | |
Paelopatides38133 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |