The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides37813 | PROTEIN CBG26694 |
Paelopatides37814 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides37815 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides37816 | NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 |
Paelopatides37817 | DIMETHYLANILINE MONOOXYGENASE |
Paelopatides37818 | |
Paelopatides37819 | RING FINGER PROTEIN 31-RELATED |
Paelopatides37820 | ENDONUCLEASE-RELATED |
Paelopatides37821 | |
Paelopatides37822 | CORTACTIN AND DREBRIN |
Paelopatides37823 | MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE |
Paelopatides37824 | AMINO ACID TRANSPORTER |
Paelopatides37825 | INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides37826 | PROTEIN CBG26694 |
Paelopatides37827 | T-CELL ACTIVATION INHIBITOR, MITOCHONDRIAL |
Paelopatides37828 | T-CELL ACTIVATION INHIBITOR, MITOCHONDRIAL |
Paelopatides37829 | WASH COMPLEX SUBUNIT 5 |
Paelopatides37830 | WASH COMPLEX SUBUNIT 5 |
Paelopatides37831 | WASH COMPLEX SUBUNIT 5 |
Paelopatides37832 | LD33804P |
Paelopatides37833 | RWD DOMAIN-CONTAINING PROTEIN 3 |
Paelopatides37834 | EG:EG0003.4 PROTEIN-RELATED |
Paelopatides37835 | |
Paelopatides37836 | |
Paelopatides37837 | NACHT DOMAIN-CONTAINING PROTEIN |
Paelopatides37838 | NETRIN RECEPTOR UNC5 |
Paelopatides37839 | PROTEIN CBG26694 |
Paelopatides37840 | ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAINS |
Paelopatides37841 | ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAINS |
Paelopatides37842 | CONSTITUTIVE COACTIVATOR OF PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA |
Paelopatides37843 | CELL CYCLE CHECKPOINT PROTEIN RAD17 |
Paelopatides37844 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides37845 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides37846 | |
Paelopatides37847 | |
Paelopatides37848 | |
Paelopatides37849 | SERINE-THREONINE PROTEIN KINASE |
Paelopatides37850 | GAG-RELATED PROTEIN |
Paelopatides37851 | TMEM26 PROTEIN |
Paelopatides37852 | L1 TRANSPOSABLE ELEMENT-RELATED |
Paelopatides37853 | |
Paelopatides37854 | TMEM26 PROTEIN |
Paelopatides37855 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides37856 | NOTUM-RELATED |
Paelopatides37857 | PROTEIN LIN-7 HOMOLOG |
Paelopatides37858 | TRANSDUCER OF ERBB2 TOB |
Paelopatides37859 | GALACTOSE-3-O-SULFOTRANSFERASE |
Paelopatides37860 | |
Paelopatides37861 | LEUCINE-RICH REPEAT-CONTAINING PROTEIN 51 |
Paelopatides37862 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |