The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides37609 | CYSTATIN FAMILY MEMBER |
Paelopatides37610 | |
Paelopatides37611 | MYOSIN HEAVY CHAIN, NON-MUSCLE |
Paelopatides37612 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides37613 | |
Paelopatides37614 | |
Paelopatides37615 | - |
Paelopatides37616 | |
Paelopatides37617 | PERIAXIN/AHNAK |
Paelopatides37618 | ACYL-MALONYL CONDENSING ENZYME-RELATED |
Paelopatides37619 | |
Paelopatides37620 | CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING |
Paelopatides37621 | |
Paelopatides37622 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides37623 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides37624 | RING FINGER DOMAIN-CONTAINING |
Paelopatides37625 | CARNITINE O-ACYLTRANSFERASE |
Paelopatides37626 | LEUCOKININ RECEPTOR-RELATED |
Paelopatides37627 | |
Paelopatides37628 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides37629 | EG:EG0003.4 PROTEIN-RELATED |
Paelopatides37630 | PROTEIN CBG23806 |
Paelopatides37631 | TRANSIENT RECEPTOR POTENTIAL CHANNEL |
Paelopatides37632 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Paelopatides37633 | TRANSCRIPTION TERMINATION FACTOR 2-RELATED |
Paelopatides37634 | TRANSCRIPTION TERMINATION FACTOR 2-RELATED |
Paelopatides37635 | CENTROBIN |
Paelopatides37636 | REGULATOR-RELATED |
Paelopatides37637 | ENDONUCLEASE |
Paelopatides37638 | ENDONUCLEASE |
Paelopatides37639 | C2H2-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides37640 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides37641 | |
Paelopatides37642 | |
Paelopatides37643 | |
Paelopatides37644 | PROTEIN CBG12474 |
Paelopatides37645 | ADENYLATE CYCLASE TYPE 1 |
Paelopatides37646 | ADENYLATE CYCLASE TYPE 1 |
Paelopatides37647 | TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED |
Paelopatides37648 | 5-HYDROXYTRYPTAMINE RECEPTOR |
Paelopatides37649 | |
Paelopatides37650 | |
Paelopatides37651 | |
Paelopatides37652 | PROTEIN CBG26694 |
Paelopatides37653 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides37654 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides37655 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides37656 | EXOSOME COMPLEX COMPONENT |
Paelopatides37657 | |
Paelopatides37658 | LONG-CHAIN-FATTY-ACID--COA LIGASE |