The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides37457 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides37458 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides37459 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
| Paelopatides37460 | FATTY ACID ACYL TRANSFERASE-RELATED |
| Paelopatides37461 | - |
| Paelopatides37462 | - |
| Paelopatides37463 | |
| Paelopatides37464 | DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED |
| Paelopatides37465 | DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED |
| Paelopatides37466 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides37467 | |
| Paelopatides37468 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| Paelopatides37469 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| Paelopatides37470 | |
| Paelopatides37471 | |
| Paelopatides37472 | |
| Paelopatides37473 | PCNA-ASSOCIATED FACTOR |
| Paelopatides37474 | ATAXIA TELANGIECTASIA MUTATED ATM -RELATED |
| Paelopatides37475 | EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER |
| Paelopatides37476 | ATAXIA TELANGIECTASIA MUTATED ATM -RELATED |
| Paelopatides37477 | 1,4-DIHYDROXY-2-NAPHTHOATE OCTAPRENYLTRANSFERASE |
| Paelopatides37478 | DNA REPAIR/TRANSCRIPTION PROTEIN MET18/MMS19 |
| Paelopatides37479 | UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED |
| Paelopatides37480 | |
| Paelopatides37481 | PROTEIN CBG26694 |
| Paelopatides37482 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides37483 | |
| Paelopatides37484 | |
| Paelopatides37485 | |
| Paelopatides37486 | |
| Paelopatides37487 | |
| Paelopatides37488 | |
| Paelopatides37489 | |
| Paelopatides37490 | |
| Paelopatides37491 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
| Paelopatides37492 | WD REPEAT-CONTAINING PROTEIN 97 |
| Paelopatides37493 | WD REPEAT-CONTAINING PROTEIN 97 |
| Paelopatides37494 | NEURALIZED |
| Paelopatides37495 | 40S RIBOSOMAL PROTEIN S3A |
| Paelopatides37496 | |
| Paelopatides37497 | REVERSE TRANSCRIPTASES |
| Paelopatides37498 | HERMANSKY-PUDLAK SYNDROME 4 PROTEIN LIGHT-EAR PROTEIN-RELATED |
| Paelopatides37499 | MYOSIN |
| Paelopatides37500 | OVOCHYMASE-RELATED |
| Paelopatides37501 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
| Paelopatides37502 | |
| Paelopatides37503 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides37504 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides37505 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides37506 |
