The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides37136 | HEPARAN SULFATE SULFOTRANSFERASE |
| Paelopatides37137 | ENDONUCLEASE |
| Paelopatides37138 | |
| Paelopatides37139 | |
| Paelopatides37140 | |
| Paelopatides37141 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides37142 | WD-40 REPEAT PROTEIN |
| Paelopatides37143 | STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 15 |
| Paelopatides37144 | LD35087P |
| Paelopatides37145 | MATRIX METALLOPROTEINASE |
| Paelopatides37146 | |
| Paelopatides37147 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides37148 | CYTOKINE RECEPTOR |
| Paelopatides37149 | |
| Paelopatides37150 | IG(IMMUNOGLOBULIN) AND LRR(LEUCINE RICH REPEAT) DOMAINS |
| Paelopatides37151 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides37152 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides37153 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
| Paelopatides37154 | AGAP008170-PA |
| Paelopatides37155 | MYND-TYPE DOMAIN-CONTAINING PROTEIN |
| Paelopatides37156 | |
| Paelopatides37157 | TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II |
| Paelopatides37158 | PROHIBITIN |
| Paelopatides37159 | LUPUS LA PROTEIN-RELATED |
| Paelopatides37160 | EARLY GAMETOCYTE ENRICHED PHOSPHOPROTEIN EGXP |
| Paelopatides37161 | |
| Paelopatides37162 | |
| Paelopatides37163 | |
| Paelopatides37164 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
| Paelopatides37165 | |
| Paelopatides37166 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
| Paelopatides37167 | PROTEIN CBG26694 |
| Paelopatides37168 | |
| Paelopatides37169 | |
| Paelopatides37170 | |
| Paelopatides37171 | |
| Paelopatides37172 | TRANSMEMBRANE PROTEIN 189 |
| Paelopatides37173 | TRANSPOSON |
| Paelopatides37174 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides37175 | |
| Paelopatides37176 | REVERSE TRANSCRIPTASES |
| Paelopatides37177 | |
| Paelopatides37178 | THIOREDOXIN PEROXIDASE |
| Paelopatides37179 | |
| Paelopatides37180 | |
| Paelopatides37181 | C2 DOMAIN-CONTAINING PROTEIN 5 |
| Paelopatides37182 | EXS-RELATED PROTEIN |
| Paelopatides37183 | C2 DOMAIN-CONTAINING PROTEIN 5 |
| Paelopatides37184 | PEPTIDASE |
| Paelopatides37185 | VHS DOMAIN CONTAINING PROTEIN FAMILY |
