About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633 Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides36922PHOSPHATIDYLSERINE DECARBOXYLASE
Paelopatides36923
Paelopatides36924BETA1,3-GALACTOSYLTRANSFERASE
Paelopatides36925HEAT SHOCK FACTOR 2-BINDING PROTEIN
Paelopatides36926PROTEIN CBG16200
Paelopatides36927PROTEIN CBG16200
Paelopatides36928TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED
Paelopatides36929
Paelopatides36930ENDOGLIN/TGF-BETA RECEPTOR TYPE III
Paelopatides36931APOPTOSIS-INDUCING FACTOR 1
Paelopatides36932
Paelopatides36933
Paelopatides36935FI04643P-RELATED
Paelopatides36936
Paelopatides36937NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides36938
Paelopatides36939
Paelopatides36941REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides36942ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides36943MYND-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides36944PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Paelopatides36945FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides36946
Paelopatides36948REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides36949
Paelopatides36950ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides36951GLYCOPROTEIN HORMONE RECEPTOR
Paelopatides36952
Paelopatides36953ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides36955FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides36956FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides36957FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides36958
Paelopatides36959F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides36960
Paelopatides36961TRANSPOSON
Paelopatides36962POL PROTEIN
Paelopatides36963
Paelopatides36964REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides36965PROTEIN CBG26694
Paelopatides36966PROTEIN CBG26694
Paelopatides36967ADDUCIN
Paelopatides36968
Paelopatides36969AAA DOMAIN-CONTAINING
Paelopatides36970PROTEIN CBG26694
Paelopatides36971
Paelopatides36972CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
Paelopatides36973
Paelopatides36974
Paelopatides36975ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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