The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides36720 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
Paelopatides36721 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
Paelopatides36722 | CENTROSOMAL PROTEIN OF 70 KDA |
Paelopatides36723 | TUDOR DOMAIN CONTAINING PROTEIN |
Paelopatides36724 | CENTROSOMAL PROTEIN POC5 |
Paelopatides36725 | GLYCOSYLTRANSFERASE 14 FAMILY MEMBER |
Paelopatides36726 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Paelopatides36727 | - |
Paelopatides36728 | GLYCOSYLTRANSFERASE 14 FAMILY MEMBER |
Paelopatides36729 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides36731 | |
Paelopatides36732 | |
Paelopatides36733 | |
Paelopatides36734 | |
Paelopatides36735 | |
Paelopatides36736 | MULTI-COPPER OXIDASE |
Paelopatides36737 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides36738 | |
Paelopatides36739 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides36740 | |
Paelopatides36741 | |
Paelopatides36742 | TNF RECEPTOR ASSOCIATED FACTOR |
Paelopatides36743 | TNF RECEPTOR ASSOCIATED FACTOR |
Paelopatides36744 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides36745 | |
Paelopatides36746 | PROTEIN CBG26694 |
Paelopatides36747 | PROTEIN CBG26694 |
Paelopatides36748 | TNF RECEPTOR ASSOCIATED FACTOR |
Paelopatides36749 | |
Paelopatides36750 | |
Paelopatides36751 | GH3 DOMAIN-CONTAINING PROTEIN |
Paelopatides36752 | |
Paelopatides36753 | |
Paelopatides36754 | PROTEIN SIDEKICK |
Paelopatides36755 | |
Paelopatides36756 | QUEUINE TRNA-RIBOSYLTRANSFERASE ACCESSORY SUBUNIT 2 |
Paelopatides36757 | L1 TRANSPOSABLE ELEMENT-RELATED |
Paelopatides36758 | RAB GDP/GTP EXCHANGE FACTOR |
Paelopatides36759 | RNA HELICASE |
Paelopatides36760 | OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED |
Paelopatides36761 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides36762 | |
Paelopatides36763 | ENDOGLIN/TGF-BETA RECEPTOR TYPE III |
Paelopatides36764 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides36765 | |
Paelopatides36766 | ZINC TRANSPORTER SLC39A7 HISTIDINE-RICH MEMBRANE PROTEIN KE4 |
Paelopatides36767 | SNRNP CORE PROTEIN FAMILY MEMBER |
Paelopatides36768 | UNCHARACTERIZED |
Paelopatides36769 | MICROSOMAL PROSTAGLANDIN E SYNTHASE-2 |
Paelopatides36770 | TORSIN-1A-INTERACTING PROTEIN |