The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides36567 | |
Paelopatides36568 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides36569 | OS05G0424000 PROTEIN-RELATED |
Paelopatides36570 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides36571 | |
Paelopatides36572 | PROTEIN CBG26694 |
Paelopatides36573 | |
Paelopatides36574 | POL PROTEIN |
Paelopatides36575 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides36576 | PROTEIN CBG26694 |
Paelopatides36577 | C2 DOMAIN-CONTAINING PROTEIN 5 |
Paelopatides36578 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
Paelopatides36579 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
Paelopatides36580 | |
Paelopatides36581 | PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER |
Paelopatides36582 | INTEGRATOR COMPLEX SUBUNIT 2 |
Paelopatides36583 | |
Paelopatides36584 | PROTEIN CBG26694 |
Paelopatides36585 | UBIQUITIN-CONJUGATING ENZYME E2 |
Paelopatides36586 | |
Paelopatides36587 | COMPLEMENT COMPONENT 1 |
Paelopatides36588 | |
Paelopatides36589 | PROTEIN ARGININE N-METHYLTRANSFERASE |
Paelopatides36591 | |
Paelopatides36592 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides36593 | TRANSMEMBRANE PROTEIN 141 |
Paelopatides36594 | |
Paelopatides36595 | PEROXISOMAL SARCOSINE OXIDASE |
Paelopatides36596 | STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER |
Paelopatides36597 | INTERLEUKIN-1 RECEPTOR FAMILY MEMBER |
Paelopatides36598 | |
Paelopatides36599 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
Paelopatides36600 | RADIAL SPOKE HEAD 1 HOMOLOG |
Paelopatides36601 | |
Paelopatides36602 | EXPRESSED PROTEIN |
Paelopatides36603 | BONUS, ISOFORM C-RELATED |
Paelopatides36604 | ACYL-COA DEHYDROGENASE |
Paelopatides36605 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides36606 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides36607 | |
Paelopatides36608 | CCHC-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides36609 | MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED |
Paelopatides36610 | REVERSE TRANSCRIPTASES |
Paelopatides36611 | OS05G0310600 PROTEIN |
Paelopatides36612 | CATION-TRANSPORTING ATPASE-RELATED |
Paelopatides36613 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides36614 | RETROTRANSPOSON |
Paelopatides36615 | CATION-TRANSPORTING ATPASE-RELATED |
Paelopatides36616 | |
Paelopatides36617 | PROTEIN CBG26694 |