The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides36362 | CELL ADHESION MOLECULE |
| Paelopatides36363 | |
| Paelopatides36364 | |
| Paelopatides36365 | |
| Paelopatides36366 | |
| Paelopatides36367 | RETROTRANSPOSON |
| Paelopatides36368 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| Paelopatides36369 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides36370 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
| Paelopatides36371 | |
| Paelopatides36372 | |
| Paelopatides36373 | |
| Paelopatides36374 | METHYLTRANSFERASE-RELATED |
| Paelopatides36375 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides36376 | |
| Paelopatides36377 | AMIDOPHOSPHORIBOSYLTRANSFERASE |
| Paelopatides36379 | |
| Paelopatides36380 | |
| Paelopatides36381 | ATP-DEPENDENT DNA HELICASE |
| Paelopatides36382 | CENTROSOMAL PROTEIN 2 |
| Paelopatides36383 | |
| Paelopatides36384 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides36385 | HEPARAN SULFATE 2-O-SULFOTRANSFERASE |
| Paelopatides36386 | |
| Paelopatides36387 | |
| Paelopatides36388 | |
| Paelopatides36389 | RETROTRANSPOSON |
| Paelopatides36390 | RETROTRANSPOSON |
| Paelopatides36391 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides36392 | |
| Paelopatides36393 | TRANSPOSASE, PUTATIVE-RELATED |
| Paelopatides36394 | |
| Paelopatides36395 | SUPEROXIDE DISMUTASE CU-ZN -RELATED |
| Paelopatides36396 | ZINC FINGER PROTEIN 277 |
| Paelopatides36398 | RNA RECOGNITION MOTIF-CONTAINING |
| Paelopatides36399 | SERINE/THREONINE-PROTEIN KINASE |
| Paelopatides36400 | DEHYDROGENASE RELATED |
| Paelopatides36401 | SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED |
| Paelopatides36402 | N-ACYL-PHOSPHATIDYLETHANOLAMINE-HYDROLYZING PHOSPHOLIPASE D |
| Paelopatides36403 | |
| Paelopatides36404 | SORTING NEXIN FAMILY MEMBER |
| Paelopatides36405 | |
| Paelopatides36406 | MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2 |
| Paelopatides36407 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides36408 | |
| Paelopatides36409 | REGULATOR OF CHROMOSOME CONDENSATION |
| Paelopatides36410 | |
| Paelopatides36411 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| Paelopatides36412 | |
| Paelopatides36413 |
