The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides36156 | COLLAGEN ALPHA |
| Paelopatides36157 | |
| Paelopatides36158 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides36159 | COLLAGEN ALPHA |
| Paelopatides36160 | COLLAGEN ALPHA |
| Paelopatides36161 | |
| Paelopatides36162 | |
| Paelopatides36163 | AUTOPHAGY PROTEIN 16-LIKE |
| Paelopatides36164 | G-PROTEIN COUPLED RECEPTOR |
| Paelopatides36165 | |
| Paelopatides36166 | |
| Paelopatides36167 | |
| Paelopatides36168 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
| Paelopatides36169 | - |
| Paelopatides36170 | |
| Paelopatides36171 | MULTICOPPER OXIDASE-RELATED |
| Paelopatides36172 | PROTEIN CBG26694 |
| Paelopatides36173 | ALPHA- 1,3 -FUCOSYLTRANSFERASE |
| Paelopatides36174 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides36175 | LD39211P |
| Paelopatides36176 | |
| Paelopatides36177 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides36178 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides36179 | BONUS, ISOFORM C-RELATED |
| Paelopatides36180 | BONUS, ISOFORM C-RELATED |
| Paelopatides36181 | EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA |
| Paelopatides36182 | |
| Paelopatides36183 | |
| Paelopatides36184 | |
| Paelopatides36185 | MAP-KINASE ACTIVATING DEATH DOMAIN PROTEIN MADD /DENN/AEX-3 C.ELEGANS |
| Paelopatides36186 | NEPHROCYSTIN-4 |
| Paelopatides36188 | F-BOX ONLY PROTEIN 4 |
| Paelopatides36189 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides36190 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides36191 | PROTEIN ATP6V1FNB-LIKE |
| Paelopatides36192 | NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.2 |
| Paelopatides36193 | |
| Paelopatides36194 | DEOXYRIBONUCLEASE |
| Paelopatides36195 | METHIONYL-TRNA FORMYLTRANSFERASE |
| Paelopatides36196 | MOLYBDOPTERIN COFACTOR SULFURASE MOSC |
| Paelopatides36197 | |
| Paelopatides36198 | |
| Paelopatides36199 | IMPORTIN BETA |
| Paelopatides36200 | PX SERINE/THREONINE KINASE PXK |
| Paelopatides36201 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides36202 | |
| Paelopatides36203 | |
| Paelopatides36204 | |
| Paelopatides36205 | CALRETICULIN AND CALNEXIN |
| Paelopatides36206 | EPM2A-INTERACTING PROTEIN 1 |
