The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides35844 | |
Paelopatides35845 | PROTEIN, PUTATIVE-RELATED |
Paelopatides35846 | DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN |
Paelopatides35847 | DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN |
Paelopatides35848 | SRCR DOMAIN-CONTAINING PROTEIN |
Paelopatides35849 | SRCR DOMAIN-CONTAINING PROTEIN |
Paelopatides35850 | |
Paelopatides35851 | PHENYLALANYL-TRNA SYNTHETASE |
Paelopatides35852 | SRCR DOMAIN-CONTAINING PROTEIN |
Paelopatides35853 | SI:CH211-108C17.2-RELATED-RELATED |
Paelopatides35854 | CALCIUM BINDING PROTEIN |
Paelopatides35855 | TRANSMEMBRANE PROTEIN |
Paelopatides35856 | |
Paelopatides35857 | |
Paelopatides35858 | GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT |
Paelopatides35859 | |
Paelopatides35860 | |
Paelopatides35861 | DIADENOSINE 5,5-P1,P4-TETRAPHOSPHATE PYROPHOSPHOHYDROLASE MUTT |
Paelopatides35862 | DENDRITIC CELL-SPECIFIC TRANSMEMBRANE PROTEIN |
Paelopatides35863 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides35864 | PROTEIN CBG26694 |
Paelopatides35865 | PROTEIN CBG26694 |
Paelopatides35866 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides35867 | PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA COACTIVATOR 1 PGC-1 -RELATED |
Paelopatides35868 | |
Paelopatides35869 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
Paelopatides35870 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides35871 | ENDONUCLEASE-RELATED |
Paelopatides35872 | ENDONUCLEASE-RELATED |
Paelopatides35873 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides35874 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides35875 | SLR1441 PROTEIN |
Paelopatides35876 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides35877 | PROTEIN FOLDING REGULATOR |
Paelopatides35879 | PHD FINGER PROTEIN |
Paelopatides35880 | RAN BINDING PROTEIN |
Paelopatides35881 | |
Paelopatides35882 | |
Paelopatides35883 | SELECTIN LIGAND RELATED |
Paelopatides35884 | |
Paelopatides35885 | PROTEIN CBG26694 |
Paelopatides35886 | FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides35887 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides35888 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides35889 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides35890 | |
Paelopatides35891 | PROTEIN CBG16200 |
Paelopatides35892 | |
Paelopatides35893 | PROTEIN CBG16200 |
Paelopatides35894 | YIPPEE DOMAIN-CONTAINING PROTEIN |