The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides35735 | PROTEIN CBG26694 |
Paelopatides35736 | PROTEIN CBG26694 |
Paelopatides35737 | PROTEIN CBG26694 |
Paelopatides35738 | ENOYL-COA HYDRATASE-RELATED |
Paelopatides35739 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides35740 | ZINC FINGER CCHC-TYPE AND RNA-BINDING MOTIF-CONTAINING PROTEIN 1 |
Paelopatides35741 | ZINC FINGER CCHC-TYPE AND RNA-BINDING MOTIF-CONTAINING PROTEIN 1 |
Paelopatides35742 | PROTEIN CBG26694 |
Paelopatides35743 | THIOREDOXIN-LIKE PROTEN 4A, 4B |
Paelopatides35744 | PEPTIDASE |
Paelopatides35745 | UNCHARACTERIZED |
Paelopatides35746 | TRANSMEMBRANE PROTEIN 168 |
Paelopatides35747 | TRANSMEMBRANE PROTEIN 168 |
Paelopatides35748 | |
Paelopatides35749 | |
Paelopatides35750 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides35751 | COLLAGEN IV NC1 DOMAIN-CONTAINING PROTEIN |
Paelopatides35752 | POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3 |
Paelopatides35753 | POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3 |
Paelopatides35754 | STABILIZER OF AXONEMAL MICROTUBULES 2 |
Paelopatides35755 | ENDONUCLEASE-RELATED |
Paelopatides35756 | |
Paelopatides35757 | |
Paelopatides35758 | HISTONE-LYSINE N-METHYLTRANSFERASE ASH1 |
Paelopatides35759 | E3 UBIQUITIN-PROTEIN LIGASE MARCH 2/3 FAMILY MEMBER |
Paelopatides35760 | |
Paelopatides35761 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides35762 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides35763 | |
Paelopatides35764 | |
Paelopatides35765 | |
Paelopatides35766 | CALCIUM-REGULATED HEAT STABLE PROTEIN CRHSP-24-RELATED |
Paelopatides35767 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
Paelopatides35768 | RUN AND SH3 DOMAIN CONTAINING |
Paelopatides35769 | UNCHARACTERIZED |
Paelopatides35770 | UNCHARACTERIZED |
Paelopatides35771 | TRANSAMIDASE |
Paelopatides35772 | TRANSAMIDASE |
Paelopatides35773 | SRCR DOMAIN-CONTAINING PROTEIN |
Paelopatides35774 | ENDONUCLEASE-RELATED |
Paelopatides35775 | POL PROTEIN |
Paelopatides35776 | |
Paelopatides35777 | |
Paelopatides35778 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
Paelopatides35779 | MULTICOPPER OXIDASE-RELATED |
Paelopatides35780 | |
Paelopatides35781 | SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C |
Paelopatides35782 | SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C |
Paelopatides35783 | TYROSINE-PROTEIN KINASE RECEPTOR |
Paelopatides35784 |