The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides35483 | BONUS, ISOFORM C-RELATED |
| Paelopatides35484 | ZGC:174356 |
| Paelopatides35485 | N-LYSINE METHYLTRANSFERASE KMT5A |
| Paelopatides35486 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides35487 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides35488 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides35489 | U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3 |
| Paelopatides35490 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides35491 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides35492 | METALLOPHOSPHOESTERASE |
| Paelopatides35493 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| Paelopatides35494 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| Paelopatides35495 | |
| Paelopatides35496 | PROTEIN CBG26694 |
| Paelopatides35497 | FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD |
| Paelopatides35498 | FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD |
| Paelopatides35499 | ENDONUCLEASE-RELATED |
| Paelopatides35500 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides35501 | DNA REPAIR-SCAFFOLDING PROTEIN SPIDR |
| Paelopatides35502 | RETROTRANSPOSON |
| Paelopatides35503 | RETROTRANSPOSON |
| Paelopatides35504 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| Paelopatides35505 | CYTOCHROME P450 FAMILY 4 |
| Paelopatides35506 | |
| Paelopatides35507 | SAPOSIN-RELATED |
| Paelopatides35509 | HEPARAN SULFATE 2-O-SULFOTRANSFERASE |
| Paelopatides35510 | HEPARAN SULFATE 2-O-SULFOTRANSFERASE |
| Paelopatides35511 | JAK PATHWAY SIGNAL TRANSDUCTION ADAPTOR MOLECULE |
| Paelopatides35512 | NUCLEAR FUSION PROTEIN FUS2 |
| Paelopatides35513 | UNCHARACTERIZED |
| Paelopatides35514 | |
| Paelopatides35515 | N-ACETYLGLUCOSAMINYLTRANSFERASE VI |
| Paelopatides35516 | - |
| Paelopatides35517 | COUNTIN RECEPTOR CNR3-RELATED |
| Paelopatides35518 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| Paelopatides35519 | |
| Paelopatides35520 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
| Paelopatides35521 | LD33804P |
| Paelopatides35522 | SI:CH211-196P9.1-RELATED |
| Paelopatides35523 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides35524 | IGGFC_BINDING DOMAIN-CONTAINING PROTEIN |
| Paelopatides35525 | BUCENTAUR RELATED |
| Paelopatides35526 | |
| Paelopatides35527 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides35528 | RING FINGER PROTEIN 31-RELATED |
| Paelopatides35529 | PROTEIN CBG26694 |
| Paelopatides35530 | |
| Paelopatides35531 | PROTEIN MMS22-LIKE |
| Paelopatides35532 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides35533 | SYNAPTIC ADHESION-LIKE MOLECULE SALM |
