The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides35221 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| Paelopatides35222 | RETROTRANSPOSON |
| Paelopatides35223 | TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN34-RELATED |
| Paelopatides35224 | WD40 REPEAT PROTEIN |
| Paelopatides35225 | RNA PROCESSING PROTEIN LD23810P |
| Paelopatides35226 | |
| Paelopatides35227 | |
| Paelopatides35228 | |
| Paelopatides35229 | RIBULOSE-5-PHOSPHATE-3-EPIMERASE |
| Paelopatides35230 | |
| Paelopatides35231 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides35232 | |
| Paelopatides35233 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides35234 | LEUCINE RICH REPEAT FAMILY PROTEIN |
| Paelopatides35235 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides35237 | FUMARATE HYDRATASE-RELATED |
| Paelopatides35238 | |
| Paelopatides35239 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides35240 | |
| Paelopatides35241 | PHOSPHOLIPASE A-2-ACTIVATING PROTEIN |
| Paelopatides35248 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37 |
| Paelopatides35249 | |
| Paelopatides35250 | |
| Paelopatides35251 | |
| Paelopatides35252 | |
| Paelopatides35253 | |
| Paelopatides35254 | |
| Paelopatides35255 | |
| Paelopatides35256 | |
| Paelopatides35257 | |
| Paelopatides35258 | |
| Paelopatides35259 | |
| Paelopatides35260 | PROTEIN CBG26694 |
| Paelopatides35261 | PROTEIN CBG26694 |
| Paelopatides35262 | O-METHYLTRANSFERASE-RELATED |
| Paelopatides35263 | |
| Paelopatides35264 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides35265 | CYSTEINE-RICH MOTOR NEURON 1 PROTEIN |
| Paelopatides35266 | |
| Paelopatides35267 | COLLAGEN ALPHA |
| Paelopatides35268 | GATA ZINC FINGER DOMAIN-CONTAINING |
| Paelopatides35269 | ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK |
| Paelopatides35270 | PROTEIN NATD1 |
| Paelopatides35271 | CENTROSOMAL PROTEIN OF 78 KDA |
| Paelopatides35272 | ARGININE OR CREATINE KINASE |
| Paelopatides35273 | ARGININE OR CREATINE KINASE |
| Paelopatides35274 | INHIBITOR OF GROWTH PROTEIN |
| Paelopatides35275 | INHIBITOR OF GROWTH PROTEIN |
| Paelopatides35276 | |
| Paelopatides35277 | UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 |
