The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides35121 | |
| Paelopatides35122 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| Paelopatides35123 | SHORT-CHAIN DEHYDROGENASE/REDUCTASE |
| Paelopatides35124 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED |
| Paelopatides35125 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides35126 | |
| Paelopatides35127 | UNCHARACTERIZED |
| Paelopatides35128 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| Paelopatides35129 | B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR |
| Paelopatides35130 | B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR |
| Paelopatides35131 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides35132 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides35133 | T-SNARE COILED-COIL HOMOLOGY DOMAIN-CONTAINING PROTEIN |
| Paelopatides35134 | CYTOCHROME P450 FAMILY 4 |
| Paelopatides35135 | CYTOCHROME P450 FAMILY 4 |
| Paelopatides35136 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides35137 | |
| Paelopatides35138 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides35139 | |
| Paelopatides35140 | SI:CH211-262H13.3-RELATED-RELATED |
| Paelopatides35141 | PROTEIN, PUTATIVE-RELATED |
| Paelopatides35142 | |
| Paelopatides35143 | C2H2-TYPE DOMAIN-CONTAINING PROTEIN |
| Paelopatides35144 | POTASSIUM/PROTON ANTIPORTER-RELATED |
| Paelopatides35145 | IP13529P |
| Paelopatides35146 | |
| Paelopatides35147 | |
| Paelopatides35148 | OVOCHYMASE-RELATED |
| Paelopatides35149 | HISTONE DEACETYLASE HDAC1-RELATED |
| Paelopatides35150 | |
| Paelopatides35151 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides35152 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides35153 | |
| Paelopatides35154 | |
| Paelopatides35155 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides35156 | B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR |
| Paelopatides35157 | N-ALPHA-ACETYLTRANSFERASE 40 |
| Paelopatides35158 | |
| Paelopatides35159 | |
| Paelopatides35160 | |
| Paelopatides35161 | MUCIN-22 |
| Paelopatides35162 | ANAPHASE PROMOTING COMPLEX SUBUNIT 4 APC4 |
| Paelopatides35163 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides35164 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides35165 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides35166 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides35167 | MPS ONE BINDER KINASE ACTIVATOR-LIKE MOB |
| Paelopatides35168 | CONSTITUTIVE COACTIVATOR OF PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA |
| Paelopatides35169 | |
| Paelopatides35170 | FI04643P-RELATED |
