The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides34909 | INTEGRIN ALPHA |
| Paelopatides34910 | INTEGRIN ALPHA |
| Paelopatides34911 | SENTRIN/SUMO-SPECIFIC PROTEASE |
| Paelopatides34912 | SERINE/THREONINE-PROTEIN KINASE NEK |
| Paelopatides34913 | METHYLMALONYL-COA MUTASE, MITOCHONDRIAL-RELATED |
| Paelopatides34914 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides34915 | METHYLMALONYL-COA MUTASE, MITOCHONDRIAL-RELATED |
| Paelopatides34916 | |
| Paelopatides34917 | PROTEIN CBG26694 |
| Paelopatides34918 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides34919 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
| Paelopatides34920 | GRANULIN |
| Paelopatides34923 | |
| Paelopatides34924 | |
| Paelopatides34925 | PHOSPHOLIPID ACYLTRANSFERASE |
| Paelopatides34926 | LYMPHOID-SPECIFIC HELICASE |
| Paelopatides34927 | METALLOPROTEASE INHIBITOR |
| Paelopatides34928 | PROTEIN KINASE C, MU |
| Paelopatides34929 | SERINE/THREONINE-PROTEIN KINASE |
| Paelopatides34930 | UPSET, ISOFORM A |
| Paelopatides34931 | |
| Paelopatides34932 | PROTEIN CBG13728 |
| Paelopatides34933 | |
| Paelopatides34934 | ARP2/3 COMPLEX 20 KD SUBUNIT |
| Paelopatides34935 | PROTEIN GAMETE EXPRESSED 1 |
| Paelopatides34936 | |
| Paelopatides34937 | BBSOME-INTERACTING PROTEIN 1 |
| Paelopatides34938 | |
| Paelopatides34939 | AAA DOMAIN-CONTAINING |
| Paelopatides34940 | |
| Paelopatides34941 | |
| Paelopatides34942 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
| Paelopatides34943 | |
| Paelopatides34944 | |
| Paelopatides34945 | |
| Paelopatides34946 | RETROTRANSPOSON |
| Paelopatides34947 | RETROTRANSPOSON |
| Paelopatides34948 | |
| Paelopatides34949 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
| Paelopatides34950 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides34951 | B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR |
| Paelopatides34952 | |
| Paelopatides34953 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
| Paelopatides34954 | COMM DOMAIN CONTAINING PROTEIN 10 |
| Paelopatides34956 | |
| Paelopatides34957 | |
| Paelopatides34958 | POL PROTEIN |
| Paelopatides34959 | ZGC:101858 |
| Paelopatides34960 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
| Paelopatides34961 |
