The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides34746 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides34747 | REVERSE TRANSCRIPTASES |
Paelopatides34748 | MULTICOPPER OXIDASE-RELATED |
Paelopatides34749 | |
Paelopatides34750 | PROTEIN TAG-278-RELATED |
Paelopatides34751 | |
Paelopatides34752 | TYROSINE-PROTEIN PHOSPHATASE |
Paelopatides34753 | SOLUTE CARRIER FAMILY 35 |
Paelopatides34754 | PROTEIN SERAC1 |
Paelopatides34755 | |
Paelopatides34756 | EXODEOXYRIBONUCLEASE III |
Paelopatides34757 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides34758 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides34759 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides34760 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides34761 | TRANSMEMBRANE 9 SUPERFAMILY PROTEIN |
Paelopatides34762 | TRANSMEMBRANE 9 SUPERFAMILY PROTEIN |
Paelopatides34763 | CYTOCHROME P450 508A4-RELATED |
Paelopatides34764 | STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE |
Paelopatides34765 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides34766 | |
Paelopatides34767 | NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 5 |
Paelopatides34768 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides34769 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides34770 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides34771 | |
Paelopatides34772 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides34773 | MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B |
Paelopatides34774 | LYSOSOMAL-ASSOCIATED TRANSMEMBRANE PROTEIN |
Paelopatides34775 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides34776 | |
Paelopatides34785 | |
Paelopatides34786 | - |
Paelopatides34787 | |
Paelopatides34788 | |
Paelopatides34789 | CYTOKINE RECEPTOR |
Paelopatides34790 | INHIBITOR OF GROWTH PROTEIN |
Paelopatides34791 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides34792 | |
Paelopatides34793 | CYTOCHROME P450 508A4-RELATED |
Paelopatides34794 | COILED-COIL DOMAIN-CONTAINING PROTEIN 150 |
Paelopatides34795 | COILED-COIL DOMAIN-CONTAINING PROTEIN 150 |
Paelopatides34796 | PROTEIN CBG26694 |
Paelopatides34797 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides34798 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides34799 | POL PROTEIN |
Paelopatides34800 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides34801 | |
Paelopatides34802 | PELOTA |
Paelopatides34803 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |