The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides34542 | ADENOSINE KINASE |
| Paelopatides34543 | ELONGATOR COMPLEX PROTEIN 5 |
| Paelopatides34544 | |
| Paelopatides34545 | CATION-TRANSPORTING ATPASE-RELATED |
| Paelopatides34546 | CATION-TRANSPORTING ATPASE-RELATED |
| Paelopatides34547 | COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN-CONTAINING PROTEIN 5 |
| Paelopatides34548 | DRAB11-RELATED |
| Paelopatides34549 | COILED-COIL DOMAIN-CONTAINING PROTEIN 105 |
| Paelopatides34550 | GOLGIN SUBFAMILY A MEMBER-RELATED |
| Paelopatides34551 | ATP-DEPENDENT RNA AND DNA HELICASE |
| Paelopatides34552 | |
| Paelopatides34553 | MORN REPEAT-CONTAINING PROTEIN 5 |
| Paelopatides34554 | PAR-6-RELATED |
| Paelopatides34555 | |
| Paelopatides34556 | |
| Paelopatides34557 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
| Paelopatides34558 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides34559 | |
| Paelopatides34560 | |
| Paelopatides34561 | BUCENTAUR RELATED |
| Paelopatides34562 | |
| Paelopatides34563 | |
| Paelopatides34564 | |
| Paelopatides34565 | PROTEIN CBG26694 |
| Paelopatides34566 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides34567 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides34568 | BUCENTAUR RELATED |
| Paelopatides34569 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides34570 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides34571 | |
| Paelopatides34572 | UPF0598 PROTEIN C8ORF82 |
| Paelopatides34573 | |
| Paelopatides34574 | UBIQUITIN-CONJUGATING ENZYME E2 |
| Paelopatides34575 | |
| Paelopatides34576 | TRNA-DIHYDROURIDINE(20) SYNTHASE [NAD(P)+]-LIKE |
| Paelopatides34577 | |
| Paelopatides34578 | TRNA-DIHYDROURIDINE(20) SYNTHASE [NAD(P)+]-LIKE |
| Paelopatides34579 | TRNA-DIHYDROURIDINE(20) SYNTHASE [NAD(P)+]-LIKE |
| Paelopatides34580 | |
| Paelopatides34581 | |
| Paelopatides34582 | |
| Paelopatides34583 | |
| Paelopatides34584 | |
| Paelopatides34585 | ORIGIN RECOGNITION COMPLEX SUBUNIT 6 |
| Paelopatides34586 | PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED |
| Paelopatides34587 | HEN1 |
| Paelopatides34588 | |
| Paelopatides34589 | - |
| Paelopatides34590 | |
| Paelopatides34591 | SRCR DOMAIN-CONTAINING PROTEIN |
