The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides34491 | |
| Paelopatides34492 | NF-KAPPA-B INHIBITOR ALPHA |
| Paelopatides34493 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides34494 | |
| Paelopatides34495 | PROTEIN CBG26694 |
| Paelopatides34497 | |
| Paelopatides34498 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides34499 | SEPIAPTERIN REDUCTASE |
| Paelopatides34500 | |
| Paelopatides34501 | G-PROTEIN COUPLED RECEPTOR |
| Paelopatides34502 | |
| Paelopatides34503 | |
| Paelopatides34504 | FACIOGENITAL DYSPLASIA PROTEIN |
| Paelopatides34505 | |
| Paelopatides34506 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| Paelopatides34507 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides34508 | |
| Paelopatides34509 | CYTOSOLIC RESINIFERATOXIN BINDING PROTEIN RBP-26 |
| Paelopatides34510 | TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides34511 | TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides34512 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides34513 | |
| Paelopatides34514 | |
| Paelopatides34515 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides34516 | |
| Paelopatides34517 | |
| Paelopatides34518 | |
| Paelopatides34519 | HYR DOMAIN-CONTAINING PROTEIN |
| Paelopatides34520 | FI04643P-RELATED |
| Paelopatides34521 | |
| Paelopatides34522 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| Paelopatides34523 | ALPHA-2,8-SIALYLTRANSFERASE |
| Paelopatides34524 | |
| Paelopatides34525 | NITRILASE-RELATED |
| Paelopatides34526 | |
| Paelopatides34527 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides34528 | |
| Paelopatides34529 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides34530 | |
| Paelopatides34531 | |
| Paelopatides34532 | |
| Paelopatides34533 | ADENOSINE KINASE |
| Paelopatides34534 | PROTEIN CBG26694 |
| Paelopatides34535 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
| Paelopatides34536 | ADENOSINE KINASE |
| Paelopatides34537 | ADENOSINE KINASE |
| Paelopatides34538 | ADENOSINE KINASE |
| Paelopatides34539 | PHENAZINE BIOSYNTHESIS PROTEIN |
| Paelopatides34540 | PHENAZINE BIOSYNTHESIS PROTEIN |
| Paelopatides34541 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
