The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides34592 | EUKARYOTIC TRANSLATION INITIATION FACTOR |
Paelopatides34593 | |
Paelopatides34594 | ZINC FINGER PROTEIN |
Paelopatides34595 | 60S RIBOSOMAL PROTEIN L17 |
Paelopatides34596 | SODIUM/POTASSIUM/CALCIUM EXCHANGER |
Paelopatides34597 | PROTEIN CBG26694 |
Paelopatides34598 | |
Paelopatides34599 | |
Paelopatides34600 | |
Paelopatides34601 | EARLY GAMETOCYTE ENRICHED PHOSPHOPROTEIN EGXP |
Paelopatides34603 | SCAVENGER RECEPTOR CLASS B TYPE-1 SR-B1 |
Paelopatides34604 | |
Paelopatides34605 | |
Paelopatides34606 | MYELIN PROTEOLIPID |
Paelopatides34607 | HEPARAN SULFATE 2-O-SULFOTRANSFERASE |
Paelopatides34608 | CYSTEINE PROTEASE FAMILY C1-RELATED |
Paelopatides34609 | |
Paelopatides34610 | |
Paelopatides34611 | |
Paelopatides34612 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides34613 | RETROTRANSPOSON |
Paelopatides34614 | ENDONUCLEASE-RELATED |
Paelopatides34615 | ACETYL-COA CARBOXYLASE, ISOFORM A |
Paelopatides34616 | |
Paelopatides34617 | ACETYL-COA CARBOXYLASE, ISOFORM A |
Paelopatides34618 | TRANSMEMBRANE PROTEIN |
Paelopatides34619 | ACETYL-COA CARBOXYLASE, ISOFORM A |
Paelopatides34620 | PROTEIN DISULFIDE-ISOMERASE TMX3 |
Paelopatides34621 | PREFOLDIN SUBUNIT 4 |
Paelopatides34622 | |
Paelopatides34623 | LOW-DENSITY LIPOPROTEIN RECEPTOR CLASS A DOMAIN-CONTAINING PROTEIN 2 |
Paelopatides34624 | DNA TOPOISOMERASE I |
Paelopatides34625 | |
Paelopatides34626 | |
Paelopatides34627 | |
Paelopatides34628 | MALE-SPECIFIC LETHAL-1 PROTEIN |
Paelopatides34629 | SMALL UBIQUITIN-RELATED MODIFIER |
Paelopatides34630 | B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR |
Paelopatides34631 | OPSIN |
Paelopatides34632 | |
Paelopatides34633 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides34634 | GLUCOSAMINE-6-PHOSPHATE ISOMERASE |
Paelopatides34635 | |
Paelopatides34636 | |
Paelopatides34637 | |
Paelopatides34638 | |
Paelopatides34639 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides34640 | SURVIVAL OF MOTOR NEURON-RELATED-SPLICING FACTOR 30-RELATED |
Paelopatides34641 | COMPONENT OF OLIGOMERIC GOLGI COMPLEX 6 |
Paelopatides34642 | CARBOHYDRATE SULFOTRANSFERASE |