The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides34693 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides34694 | |
| Paelopatides34695 | NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER |
| Paelopatides34696 | |
| Paelopatides34697 | |
| Paelopatides34698 | |
| Paelopatides34699 | |
| Paelopatides34700 | |
| Paelopatides34701 | TUDOR DOMAIN CONTAINING PROTEIN |
| Paelopatides34702 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| Paelopatides34703 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides34704 | NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING |
| Paelopatides34705 | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE |
| Paelopatides34706 | PHOSPHORYLASE B KINASE REGULATORY SUBUNIT |
| Paelopatides34707 | PHOSPHORYLASE B KINASE REGULATORY SUBUNIT |
| Paelopatides34708 | FI04643P-RELATED |
| Paelopatides34709 | CXXC-TYPE ZINC FINGER PROTEIN 1 |
| Paelopatides34710 | IP13529P |
| Paelopatides34711 | PARANEOPLASTIC ANTIGEN |
| Paelopatides34712 | PROTEIN CBG26694 |
| Paelopatides34713 | |
| Paelopatides34714 | |
| Paelopatides34715 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA |
| Paelopatides34716 | UNCHARACTERIZED |
| Paelopatides34717 | |
| Paelopatides34718 | HEDGEHOG-INTERACTING PROTEIN |
| Paelopatides34719 | GLYCOPROTEIN HORMONE RECEPTOR |
| Paelopatides34720 | LIN-9 |
| Paelopatides34721 | THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 |
| Paelopatides34722 | |
| Paelopatides34723 | |
| Paelopatides34724 | THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 |
| Paelopatides34725 | LIN-9 |
| Paelopatides34726 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides34727 | |
| Paelopatides34728 | RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6 |
| Paelopatides34729 | |
| Paelopatides34730 | DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT |
| Paelopatides34731 | NATURAL KILLER CELL-SPECIFIC ANTIGEN KLIP1 |
| Paelopatides34732 | PROTEIN CBG26694 |
| Paelopatides34733 | |
| Paelopatides34735 | BONUS, ISOFORM C-RELATED |
| Paelopatides34736 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides34739 | RIBOSOMAL PROTEIN S6 KINASE |
| Paelopatides34740 | ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2 |
| Paelopatides34741 | |
| Paelopatides34742 | DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A |
| Paelopatides34743 | DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A |
| Paelopatides34744 | DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A |
| Paelopatides34745 |
