The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides34643 | RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 9-RELATED |
| Paelopatides34644 | PHOSPHATASE WITH HOMOLOGY TO TENSIN |
| Paelopatides34645 | |
| Paelopatides34646 | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED |
| Paelopatides34647 | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED |
| Paelopatides34648 | UNCHARACTERIZED |
| Paelopatides34649 | NUCLEAR HORMONE RECEPTOR |
| Paelopatides34650 | |
| Paelopatides34651 | |
| Paelopatides34652 | |
| Paelopatides34653 | RETROTRANSPOSON |
| Paelopatides34654 | RETROTRANSPOSON |
| Paelopatides34655 | |
| Paelopatides34656 | REVERSE TRANSCRIPTASES |
| Paelopatides34657 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides34658 | WSCD FAMILY MEMBER CG9164 |
| Paelopatides34659 | |
| Paelopatides34660 | SYNAPTONEMAL COMPLEX CENTRAL ELEMENT PROTEIN 2 |
| Paelopatides34661 | TRANSPOSON |
| Paelopatides34662 | |
| Paelopatides34663 | THIOREDOXIN-LIKE PROTEIN 1 |
| Paelopatides34664 | PROTEIN CBG03580 |
| Paelopatides34665 | FANCONI-ASSOCIATED NUCLEASE 1 |
| Paelopatides34666 | |
| Paelopatides34667 | POTASSIUM CHANNEL, SUBFAMILY K |
| Paelopatides34668 | - |
| Paelopatides34669 | UNCHARACTERIZED |
| Paelopatides34670 | |
| Paelopatides34671 | PURPLE ACID PHOSPHATASE |
| Paelopatides34672 | TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6 |
| Paelopatides34673 | MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED |
| Paelopatides34674 | KIAA0586 PROTEIN |
| Paelopatides34675 | MYELIN TRANSCRIPTION FACTOR 1-RELATED |
| Paelopatides34676 | |
| Paelopatides34677 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
| Paelopatides34678 | |
| Paelopatides34679 | |
| Paelopatides34680 | |
| Paelopatides34681 | SULFURTRANSFERASE-RELATED |
| Paelopatides34682 | DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN |
| Paelopatides34683 | DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN |
| Paelopatides34684 | COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED |
| Paelopatides34685 | EXTRA SPINDLE POLES 1-RELATED |
| Paelopatides34686 | |
| Paelopatides34687 | |
| Paelopatides34688 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides34689 | ALPHA- 1,3 -FUCOSYLTRANSFERASE |
| Paelopatides34690 | N-ACETYLGALACTOSAMINYLTRANSFERASE |
| Paelopatides34691 | TESTIS-EXPRESSED PROTEIN 47 |
| Paelopatides34692 | INSULIN-LIKE PEPTIDE 2-RELATED |
