The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides35064 | O-ACYLTRANSFERASE |
| Paelopatides35065 | HEPARAN SULFATE 2-O-SULFOTRANSFERASE |
| Paelopatides35066 | |
| Paelopatides35067 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
| Paelopatides35068 | HEPARAN SULFATE 2-O-SULFOTRANSFERASE |
| Paelopatides35076 | CYCLIC-AMP RESPONSE ELEMENT BINDING PROTEIN |
| Paelopatides35077 | TRANSLATION FACTOR |
| Paelopatides35078 | |
| Paelopatides35079 | MYND-TYPE DOMAIN-CONTAINING PROTEIN |
| Paelopatides35080 | |
| Paelopatides35081 | RIBOSOMAL PROTEIN S15P/S13E |
| Paelopatides35082 | LUNG ADENOMA SUSCEPTIBILITY 1-RELATED |
| Paelopatides35083 | TRNA (GUANINE-9-) METHYLTRANSFERASE |
| Paelopatides35084 | CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA |
| Paelopatides35085 | CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA |
| Paelopatides35086 | CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18 |
| Paelopatides35087 | NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED |
| Paelopatides35088 | ALPHA-MANNOSIDASE 2C1 |
| Paelopatides35089 | |
| Paelopatides35090 | |
| Paelopatides35091 | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED |
| Paelopatides35092 | ELECTRON TRANSPORT OXIDOREDUCTASE |
| Paelopatides35093 | ELECTRON TRANSPORT OXIDOREDUCTASE |
| Paelopatides35094 | |
| Paelopatides35095 | - |
| Paelopatides35096 | |
| Paelopatides35097 | B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR |
| Paelopatides35098 | PROTEIN CBG26694 |
| Paelopatides35099 | PROTEIN CBG26694 |
| Paelopatides35100 | OPSIN |
| Paelopatides35101 | MRN COMPLEX-INTERACTING PROTEIN |
| Paelopatides35102 | LIPASE |
| Paelopatides35103 | |
| Paelopatides35104 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 27 |
| Paelopatides35105 | CHLORIDE CONDUCTANCE REGULATORY PROTEIN ICLN |
| Paelopatides35106 | |
| Paelopatides35107 | UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED |
| Paelopatides35108 | UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED |
| Paelopatides35109 | PEPTIDE CHAIN RELEASE FACTOR |
| Paelopatides35110 | |
| Paelopatides35111 | |
| Paelopatides35112 | SCHWANNOMIN INTERACTING PROTEIN 1 |
| Paelopatides35113 | SCHWANNOMIN INTERACTING PROTEIN 1 |
| Paelopatides35114 | CHLORIDE CONDUCTANCE REGULATORY PROTEIN ICLN |
| Paelopatides35115 | STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER |
| Paelopatides35116 | STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER |
| Paelopatides35117 | |
| Paelopatides35118 | |
| Paelopatides35119 | |
| Paelopatides35120 |
