The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides35278 | PEPTIDASE |
| Paelopatides35279 | UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 |
| Paelopatides35280 | SPRY DOMAIN CONTAINING SOCS BOX PROTEIN |
| Paelopatides35281 | |
| Paelopatides35282 | |
| Paelopatides35283 | |
| Paelopatides35284 | PEPTIDASE S8 |
| Paelopatides35285 | TRANSCRIPTION FACTOR DP |
| Paelopatides35286 | LD25575P |
| Paelopatides35287 | |
| Paelopatides35288 | |
| Paelopatides35289 | TRANSPOSON |
| Paelopatides35290 | CYSTEINYL-TRNA SYNTHETASE |
| Paelopatides35291 | CYSTEINYL-TRNA SYNTHETASE |
| Paelopatides35292 | |
| Paelopatides35293 | |
| Paelopatides35294 | |
| Paelopatides35295 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED |
| Paelopatides35296 | UNCHARACTERIZED |
| Paelopatides35297 | |
| Paelopatides35298 | |
| Paelopatides35299 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides35300 | |
| Paelopatides35301 | |
| Paelopatides35302 | |
| Paelopatides35303 | SI:CH211-196P9.1-RELATED |
| Paelopatides35304 | |
| Paelopatides35305 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides35306 | RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN |
| Paelopatides35307 | RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN |
| Paelopatides35308 | |
| Paelopatides35309 | PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED |
| Paelopatides35310 | TRANSGELIN |
| Paelopatides35311 | MCG131172, ISOFORM CRA_A |
| Paelopatides35312 | |
| Paelopatides35313 | |
| Paelopatides35314 | |
| Paelopatides35315 | |
| Paelopatides35316 | SI:CH211-108C17.2-RELATED-RELATED |
| Paelopatides35317 | |
| Paelopatides35321 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED |
| Paelopatides35322 | HISTIDYL-TRNA SYNTHETASE |
| Paelopatides35323 | |
| Paelopatides35324 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides35325 | DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2 |
| Paelopatides35326 | DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2 |
| Paelopatides35327 | SENSOR KINASE-RELATED |
| Paelopatides35328 | MULTICOPPER OXIDASE-RELATED |
| Paelopatides35329 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides35330 |
