The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides35331 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides35332 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides35334 | CELL FATE DETERMINING PROTEIN MAB21-RELATED |
| Paelopatides35335 | |
| Paelopatides35336 | BEIGE/BEACH-RELATED |
| Paelopatides35337 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| Paelopatides35338 | |
| Paelopatides35339 | BEIGE/BEACH-RELATED |
| Paelopatides35340 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides35341 | |
| Paelopatides35342 | HEAT SHOCK PROTEIN 90 FAMILY MEMBER |
| Paelopatides35343 | HEAT SHOCK PROTEIN 90 FAMILY MEMBER |
| Paelopatides35344 | V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT |
| Paelopatides35345 | WD40 REPEAT PROTEIN |
| Paelopatides35346 | WD40 REPEAT PROTEIN |
| Paelopatides35347 | RETROTRANSPOSON |
| Paelopatides35348 | |
| Paelopatides35349 | CYCLINS |
| Paelopatides35350 | PHOSPHATIDYLINOSITOL KINASE |
| Paelopatides35351 | |
| Paelopatides35352 | |
| Paelopatides35353 | N-ACETYLGLUCOSAMINE-6-SULFATASE FAMILY MEMBER |
| Paelopatides35354 | |
| Paelopatides35355 | N-ACETYLGLUCOSAMINE-6-SULFATASE FAMILY MEMBER |
| Paelopatides35356 | |
| Paelopatides35357 | BRCA1-ASSOCIATED ATM ACTIVATOR 1 |
| Paelopatides35358 | PEFLIN |
| Paelopatides35359 | |
| Paelopatides35360 | UNCHARACTERIZED |
| Paelopatides35361 | UNCHARACTERIZED |
| Paelopatides35362 | CYTOCHROME B-245 CHAPERONE 1 |
| Paelopatides35363 | |
| Paelopatides35364 | ZINC FINGER PROTEIN 207 |
| Paelopatides35365 | |
| Paelopatides35366 | DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED |
| Paelopatides35367 | BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 1 |
| Paelopatides35368 | |
| Paelopatides35369 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12 |
| Paelopatides35370 | |
| Paelopatides35371 | GALACTOSE-3-O-SULFOTRANSFERASE |
| Paelopatides35372 | |
| Paelopatides35373 | ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE |
| Paelopatides35374 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT |
| Paelopatides35375 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides35376 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT |
| Paelopatides35377 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT |
| Paelopatides35378 | V-TYPE PROTON ATPASE SUBUNIT C |
| Paelopatides35379 | U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD |
| Paelopatides35380 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
| Paelopatides35381 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
