The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides35432 | |
| Paelopatides35433 | ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED |
| Paelopatides35434 | SIALIDASE |
| Paelopatides35435 | |
| Paelopatides35436 | |
| Paelopatides35437 | SI:CH211-108C17.2-RELATED-RELATED |
| Paelopatides35438 | ZGC:195170 |
| Paelopatides35439 | |
| Paelopatides35440 | |
| Paelopatides35441 | OVOCHYMASE-RELATED |
| Paelopatides35443 | CDC42 SMALL EFFECTOR PROTEIN HOMOLOG |
| Paelopatides35444 | |
| Paelopatides35445 | SIGNAL PEPTIDE PEPTIDASE |
| Paelopatides35446 | SMALL NUCLEAR RIBONUCLEOPROTEIN |
| Paelopatides35447 | |
| Paelopatides35448 | MESODERM DEVELOPMENT CANDIDATE 2 |
| Paelopatides35449 | SOLUTE CARRIER FAMILY 34 SODIUM PHOSPHATE , MEMBER 2-RELATED |
| Paelopatides35450 | STEROL DESATURASE-RELATED PROTEIN |
| Paelopatides35451 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides35452 | REVERSE TRANSCRIPTASES |
| Paelopatides35453 | DAZ-ASSOCIATED PROTEIN 2 |
| Paelopatides35454 | |
| Paelopatides35455 | ANKYRIN REPEAT FAMILY PROTEIN |
| Paelopatides35456 | OS01G0621700 PROTEIN |
| Paelopatides35457 | MYOSIN |
| Paelopatides35458 | REVERSE TRANSCRIPTASE |
| Paelopatides35459 | |
| Paelopatides35460 | EXPRESSED PROTEIN |
| Paelopatides35461 | TYROSINE-PROTEIN KINASE |
| Paelopatides35462 | |
| Paelopatides35463 | ENZYMATIC POLYPROTEIN-RELATED |
| Paelopatides35464 | |
| Paelopatides35465 | |
| Paelopatides35466 | |
| Paelopatides35467 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
| Paelopatides35468 | |
| Paelopatides35469 | RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG |
| Paelopatides35470 | NHL REPEAT-CONTAINING PROTEIN-RELATED |
| Paelopatides35471 | VESICLE PROTEIN SORTING-ASSOCIATED |
| Paelopatides35472 | MATRIX METALLOPROTEINASE |
| Paelopatides35473 | UNCHARACTERIZED |
| Paelopatides35474 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
| Paelopatides35475 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides35476 | |
| Paelopatides35477 | PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN |
| Paelopatides35478 | PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN |
| Paelopatides35479 | |
| Paelopatides35480 | |
| Paelopatides35481 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides35482 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
