The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides35584 | SMALL NUCLEAR RIBONUCLEOPROTEIN SM |
| Paelopatides35585 | RPA-INTERACTING PROTEIN RPAIN |
| Paelopatides35586 | INO80 COMPLEX SUBUNIT B |
| Paelopatides35587 | |
| Paelopatides35588 | RAB GTPASE-BINDING EFFECTOR PROTEIN |
| Paelopatides35589 | |
| Paelopatides35590 | |
| Paelopatides35591 | TUBULIN |
| Paelopatides35592 | |
| Paelopatides35593 | ZINC FINGER PROTEIN |
| Paelopatides35594 | BEN DOMAIN-CONTAINING PROTEIN 6 |
| Paelopatides35595 | DED DOMAIN-CONTAINING PROTEIN |
| Paelopatides35596 | MULTICOPPER OXIDASE-RELATED |
| Paelopatides35597 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides35598 | |
| Paelopatides35599 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
| Paelopatides35600 | TRANSPOSON |
| Paelopatides35601 | |
| Paelopatides35602 | PROTEIN CBG26694 |
| Paelopatides35603 | PROTEIN CBG26694 |
| Paelopatides35604 | |
| Paelopatides35605 | NUCLEOLAR AND SPINDLE-ASSOCIATED PROTEIN 1 |
| Paelopatides35606 | |
| Paelopatides35607 | NUCLEOLAR AND SPINDLE-ASSOCIATED PROTEIN 1 |
| Paelopatides35608 | SERINE-THREONINE PROTEIN KINASE |
| Paelopatides35609 | |
| Paelopatides35610 | ALPHA-AMYLASE |
| Paelopatides35611 | ALPHA-AMYLASE |
| Paelopatides35612 | LYSINE-SPECIFIC DEMETHYLASE |
| Paelopatides35613 | PHD FINGER PROTEINS |
| Paelopatides35614 | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED |
| Paelopatides35615 | - |
| Paelopatides35616 | - |
| Paelopatides35617 | DIPHTHINE SYNTHASE |
| Paelopatides35618 | AP COMPLEX SUBUNIT MU |
| Paelopatides35619 | MITOCHONDRIAL RIBOSOME PROTEIN L39/PROLYL-TRNA LIGASE FAMILY MEMBER |
| Paelopatides35620 | TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA |
| Paelopatides35621 | HYALURONIC ACID-BINDING PROTEIN 4 |
| Paelopatides35622 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6 |
| Paelopatides35623 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6 |
| Paelopatides35624 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides35625 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6 |
| Paelopatides35626 | SYNAPTIC ADHESION-LIKE MOLECULE SALM |
| Paelopatides35627 | |
| Paelopatides35628 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| Paelopatides35629 | CHARGED MULTIVESICULAR BODY PROTEIN |
| Paelopatides35630 | |
| Paelopatides35631 | DEOXYNUCLEOSIDE KINASE |
| Paelopatides35632 | |
| Paelopatides35633 | UNCHARACTERIZED |
