The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides35684 | |
| Paelopatides35685 | VACUOLAR PROTEIN SORTING VPS41 |
| Paelopatides35686 | PEPTIDOGLYCAN RECOGNITION PROTEIN |
| Paelopatides35687 | PLEXIN |
| Paelopatides35688 | ATP-DEPENDENT DNA HELICASE |
| Paelopatides35689 | |
| Paelopatides35690 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides35691 | |
| Paelopatides35692 | |
| Paelopatides35693 | |
| Paelopatides35694 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides35695 | HEPARAN SULFATE SULFOTRANSFERASE |
| Paelopatides35696 | |
| Paelopatides35697 | RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1 |
| Paelopatides35698 | NETRIN RECEPTOR UNC5 |
| Paelopatides35700 | AGAP001464-PB |
| Paelopatides35701 | SUCCINYL-COA--D-CITRAMALATE COA-TRANSFERASE |
| Paelopatides35702 | ALPHA- 1,3 -FUCOSYLTRANSFERASE |
| Paelopatides35703 | ALPHA- 1,3 -FUCOSYLTRANSFERASE |
| Paelopatides35704 | |
| Paelopatides35705 | SULFOTRANSFERASE SULT |
| Paelopatides35706 | |
| Paelopatides35707 | |
| Paelopatides35708 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides35709 | |
| Paelopatides35710 | |
| Paelopatides35711 | |
| Paelopatides35712 | |
| Paelopatides35713 | |
| Paelopatides35714 | PHOSPHORYLASE B KINASE REGULATORY SUBUNIT |
| Paelopatides35715 | ENDONUCLEASE-RELATED |
| Paelopatides35716 | POL PROTEIN |
| Paelopatides35717 | CYTOPLASMIC POLYADENYLATION ELEMENT BINDING PROTEIN CPEB |
| Paelopatides35718 | |
| Paelopatides35719 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides35720 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
| Paelopatides35721 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
| Paelopatides35722 | GALACTOSE-3-O-SULFOTRANSFERASE |
| Paelopatides35723 | |
| Paelopatides35724 | |
| Paelopatides35725 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides35726 | CEREBRAL CAVERNOUS MALFORMATIONS PROTEIN 2 HOMOLOG |
| Paelopatides35727 | |
| Paelopatides35728 | DEDICATOR OF CYTOKINESIS |
| Paelopatides35729 | |
| Paelopatides35730 | DEDICATOR OF CYTOKINESIS |
| Paelopatides35731 | CENTROMERE PROTEIN K |
| Paelopatides35732 | |
| Paelopatides35733 | PROTEIN CBG26694 |
| Paelopatides35734 |
