The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides35382 | U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD |
Paelopatides35383 | |
Paelopatides35384 | RFX TRANSCRIPTION FACTOR FAMILY |
Paelopatides35385 | ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7 |
Paelopatides35386 | CRUMBS FAMILY MEMBER |
Paelopatides35387 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Paelopatides35388 | |
Paelopatides35389 | ER MEMBRANE PROTEIN COMPLEX SUBUNIT 4 |
Paelopatides35390 | RAB GDP/GTP EXCHANGE FACTOR |
Paelopatides35391 | NADH DEHYDROGENASE UBIQUINONE FLAVOPROTEIN 2, MITOCHONDRIAL |
Paelopatides35392 | N6-ADENOSINE-METHYLTRANSFERASE |
Paelopatides35393 | |
Paelopatides35394 | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER |
Paelopatides35395 | MUCIN-2 |
Paelopatides35396 | SPORE COAT PROTEIN SP85 |
Paelopatides35397 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides35398 | TETRATRICOPEPTIDE REPEAT PROTEIN 23 |
Paelopatides35399 | |
Paelopatides35400 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides35401 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides35402 | |
Paelopatides35403 | UBIQUITIN-CONJUGATING ENZYME E2 |
Paelopatides35404 | INTERFERON REGULATORY FACTOR |
Paelopatides35405 | |
Paelopatides35406 | DEOXYNUCLEOSIDE KINASE |
Paelopatides35407 | |
Paelopatides35408 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides35409 | RAS-LIKE FAMILY MEMBER 11 |
Paelopatides35410 | HEPARAN SULFATE SULFOTRANSFERASE |
Paelopatides35411 | |
Paelopatides35412 | MACROGLOBULIN / COMPLEMENT |
Paelopatides35413 | MACROGLOBULIN / COMPLEMENT |
Paelopatides35414 | |
Paelopatides35415 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
Paelopatides35416 | AGAP009604-PA |
Paelopatides35417 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
Paelopatides35418 | MACROGLOBULIN / COMPLEMENT |
Paelopatides35419 | |
Paelopatides35420 | |
Paelopatides35421 | |
Paelopatides35422 | |
Paelopatides35423 | |
Paelopatides35424 | |
Paelopatides35425 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides35426 | TUMOR PROTEIN P53-INDUCIBLE PROTEIN 13 |
Paelopatides35427 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Paelopatides35428 | |
Paelopatides35429 | OLIGOPEPTIDE TRANSPORTER-RELATED |
Paelopatides35430 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides35431 | ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED |