The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides35634 | PROTEIN CBG26694 |
| Paelopatides35635 | |
| Paelopatides35636 | |
| Paelopatides35637 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 221 |
| Paelopatides35638 | PROTEIN CBG26694 |
| Paelopatides35639 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| Paelopatides35640 | RETROTRANSPOSON |
| Paelopatides35641 | RETROTRANSPOSON |
| Paelopatides35642 | RETROTRANSPOSON |
| Paelopatides35643 | RETROTRANSPOSON |
| Paelopatides35644 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides35645 | OPSIN |
| Paelopatides35646 | B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR |
| Paelopatides35647 | RAS-RELATED PROTEIN RAB |
| Paelopatides35648 | |
| Paelopatides35649 | TWO PORE CALCIUM CHANNEL PROTEIN 1 |
| Paelopatides35650 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides35651 | TWO PORE CALCIUM CHANNEL PROTEIN 1 |
| Paelopatides35652 | IQ DOMAIN-CONTAINING PROTEIN D |
| Paelopatides35653 | |
| Paelopatides35654 | |
| Paelopatides35655 | NITRIC OXIDE SYNTHASE-RELATED |
| Paelopatides35656 | CXXC-TYPE ZINC FINGER PROTEIN 1 |
| Paelopatides35657 | REVERSE TRANSCRIPTASES |
| Paelopatides35658 | ODD-SKIPPED - RELATED |
| Paelopatides35659 | ENDONUCLEASE |
| Paelopatides35660 | PROTEIN CBG26694 |
| Paelopatides35661 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides35662 | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED |
| Paelopatides35663 | METHYL-ACCEPTING CHEMOTAXIS PROTEIN MCPB |
| Paelopatides35664 | REPRESSOR OF YIELD OF DENV PROTEIN |
| Paelopatides35665 | NUCLEAR HORMONE RECEPTOR |
| Paelopatides35666 | |
| Paelopatides35667 | NUCLEAR HORMONE RECEPTOR |
| Paelopatides35668 | SI:CH73-193C12.2-RELATED |
| Paelopatides35669 | SOLUTE CARRIER FAMILY 22 MEMBER |
| Paelopatides35670 | GOLGI-LOCALIZED, GAMMA-ADAPTIN EAR CONTAINING, ARF BINDING PROTEIN |
| Paelopatides35671 | SERINE HYDROXYMETHYLTRANSFERASE |
| Paelopatides35672 | ABC TRANSPORTER G FAMILY MEMBER 28 |
| Paelopatides35673 | DYNEIN HEAVY CHAIN |
| Paelopatides35674 | DYNEIN HEAVY CHAIN |
| Paelopatides35675 | MALE FERTILITY FACTOR KL5 |
| Paelopatides35676 | REVERSE TRANSCRIPTASES |
| Paelopatides35677 | PROTEIN EVA-1 |
| Paelopatides35678 | POL PROTEIN |
| Paelopatides35679 | G PROTEIN-COUPLED RECEPTOR-RELATED |
| Paelopatides35680 | |
| Paelopatides35681 | |
| Paelopatides35682 | |
| Paelopatides35683 | MICROSPHERULE PROTEIN 1 |
