The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides35785 | |
| Paelopatides35786 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
| Paelopatides35787 | ATP-DEPENDENT DNA HELICASE |
| Paelopatides35788 | |
| Paelopatides35789 | REVERSE TRANSCRIPTASE |
| Paelopatides35790 | SMALL NUCLEAR RIBONUCLEOPROTEIN SM |
| Paelopatides35791 | ENDONUCLEASE-RELATED |
| Paelopatides35792 | BUCENTAUR RELATED |
| Paelopatides35793 | |
| Paelopatides35794 | PROTEIN FAM167A |
| Paelopatides35795 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides35796 | LARVAL STORAGE PROTEIN/PHENOLOXIDASE |
| Paelopatides35797 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides35798 | LARVAL STORAGE PROTEIN/PHENOLOXIDASE |
| Paelopatides35799 | PARTNER OF XRN-2 PROTEIN 1 |
| Paelopatides35800 | |
| Paelopatides35801 | ANKYRIN REPEAT FAMILY PROTEIN |
| Paelopatides35802 | RAGULATOR COMPLEX PROTEIN LAMTOR1 |
| Paelopatides35803 | |
| Paelopatides35804 | PROTEIN ABHD18 |
| Paelopatides35805 | PROTEIN ABHD18 |
| Paelopatides35806 | BIFUNCTIONAL DTTP/UTP PYROPHOSPHATASE/METHYLTRANSFERASE PROTEIN-RELATED |
| Paelopatides35807 | SAP30 |
| Paelopatides35808 | |
| Paelopatides35809 | DIMETHYLARGININE DIMETHYLAMINOHYDROLASE |
| Paelopatides35810 | DIMETHYLARGININE DIMETHYLAMINOHYDROLASE |
| Paelopatides35811 | DIMETHYLARGININE DIMETHYLAMINOHYDROLASE |
| Paelopatides35812 | DIMETHYLARGININE DIMETHYLAMINOHYDROLASE |
| Paelopatides35813 | COLLAGEN IV NC1 DOMAIN-CONTAINING PROTEIN |
| Paelopatides35814 | DIMETHYLARGININE DIMETHYLAMINOHYDROLASE |
| Paelopatides35815 | |
| Paelopatides35816 | |
| Paelopatides35817 | G-PROTEIN COUPLED RECEPTOR MTH-LIKE 1-RELATED |
| Paelopatides35818 | |
| Paelopatides35819 | HMG DOMAIN-CONTAINING PROTEIN 3 |
| Paelopatides35820 | ZGC:195170 |
| Paelopatides35821 | SI:CH211-108C17.2-RELATED-RELATED |
| Paelopatides35822 | |
| Paelopatides35831 | RETROTRANSPOSON |
| Paelopatides35832 | POL PROTEIN |
| Paelopatides35834 | |
| Paelopatides35835 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
| Paelopatides35836 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides35837 | PROTEIN CBG26694 |
| Paelopatides35838 | PROTEIN CBG26694 |
| Paelopatides35839 | PROTEIN CBG26694 |
| Paelopatides35840 | G PATCH DOMAIN-CONTAINING PROTEIN 1 |
| Paelopatides35841 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides35842 | FI04643P-RELATED |
| Paelopatides35843 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
