About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633 Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides36001TRANSMEMBRANE PROTEIN 136
Paelopatides36002
Paelopatides36003PROTEIN SEL-1 HOMOLOG 3
Paelopatides36004PROTEIN SEL-1 HOMOLOG 3
Paelopatides36005
Paelopatides36007
Paelopatides36008ZGC:195170
Paelopatides36009ENDONUCLEASE-RELATED
Paelopatides36010POL PROTEIN
Paelopatides36011ENDONUCLEASE-RELATED
Paelopatides36012PROTEIN CBG26694
Paelopatides36013
Paelopatides36014REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides36015
Paelopatides36016
Paelopatides36017
Paelopatides36018
Paelopatides36019
Paelopatides36020
Paelopatides36021FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides36022CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides36023-
Paelopatides36024XANTHINE DEHYDROGENASE
Paelopatides36025PROTEIN CBG26694
Paelopatides36026PROTEIN CBG26694
Paelopatides36027TORSIN
Paelopatides36028
Paelopatides36029PROTEIN CBG26694
Paelopatides36030UNCHARACTERIZED
Paelopatides36031
Paelopatides36032COILED-COIL ALPHA-HELICAL ROD PROTEIN 1
Paelopatides36033PROTEIN CBG26694
Paelopatides36034COILED-COIL ALPHA-HELICAL ROD PROTEIN 1
Paelopatides36035
Paelopatides36036
Paelopatides36037POTASSIUM/PROTON ANTIPORTER-RELATED
Paelopatides36038
Paelopatides36039
Paelopatides36040ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER
Paelopatides36041REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides36042ENDONUCLEASE
Paelopatides36043ENDONUCLEASE
Paelopatides36044RHO GUANINE EXCHANGE FACTOR-RELATED
Paelopatides36045APG9 AUTOPHAGY 9
Paelopatides36046
Paelopatides36047HEPARAN SULFATE 2-O-SULFOTRANSFERASE
Paelopatides36048FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides36049FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides36050FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides36051TRANSPOSABLE ELEMENT-RELATED
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