About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633 Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides36207
Paelopatides36208INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN
Paelopatides36209ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED
Paelopatides36210SMALL INTEGRAL MEMBRANE PROTEIN 20
Paelopatides36212
Paelopatides36214REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides36215
Paelopatides36216PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE
Paelopatides36217
Paelopatides36218PROTEIN CBG26694
Paelopatides36219PROTEIN CBG26694
Paelopatides36220
Paelopatides36221CCHC-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides36222MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED
Paelopatides36223BONUS, ISOFORM C-RELATED
Paelopatides36224ACYL-COA DEHYDROGENASE
Paelopatides36225MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED
Paelopatides36226YL-1 PROTEIN TRANSCRIPTION FACTOR-LIKE 1
Paelopatides36227
Paelopatides36228RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY
Paelopatides36229VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13
Paelopatides36230VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13
Paelopatides36231VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13
Paelopatides36232BONUS, ISOFORM C-RELATED
Paelopatides36233HEAT SHOCK PROTEIN HSP-12.2-RELATED
Paelopatides36234ALPHA-2,8-SIALYLTRANSFERASE
Paelopatides36235CORTACTIN AND DREBRIN
Paelopatides36236ARM REPEAT SUPERFAMILY PROTEIN
Paelopatides36237ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides36238EPM2A-INTERACTING PROTEIN 1
Paelopatides36239KELCH DOMAIN-CONTAINING PROTEIN
Paelopatides36240
Paelopatides36241FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides36242
Paelopatides36243
Paelopatides36244CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides36245PROTEIN CBG26694
Paelopatides36246PROTEIN CBG26694
Paelopatides36247PROTEIN CBG26694
Paelopatides36248EGALITARIAN, ISOFORM B
Paelopatides36249EGALITARIAN, ISOFORM B
Paelopatides36250ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides36251ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides36253NUCLEAR CAP-BINDING PROTEIN SUBUNIT 3
Paelopatides36254UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Paelopatides36255GH02722P
Paelopatides36256
Paelopatides36257PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides36258
Paelopatides36259GLUTATHIONE S-TRANSFERASE
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