The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides36414 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides36415 | |
Paelopatides36416 | |
Paelopatides36417 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides36418 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides36419 | ACYL-MALONYL CONDENSING ENZYME-RELATED |
Paelopatides36420 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides36422 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides36423 | PROTEIN CBG26694 |
Paelopatides36424 | PROTEIN CBG26694 |
Paelopatides36425 | |
Paelopatides36426 | |
Paelopatides36427 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides36428 | ENDONUCLEASE-RELATED |
Paelopatides36429 | POL PROTEIN |
Paelopatides36430 | RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1 |
Paelopatides36431 | AMINOTRANSFERASE CLASS III |
Paelopatides36433 | |
Paelopatides36434 | ACYL-MALONYL CONDENSING ENZYME-RELATED |
Paelopatides36435 | ACYL-MALONYL CONDENSING ENZYME-RELATED |
Paelopatides36436 | ACYL-MALONYL CONDENSING ENZYME-RELATED |
Paelopatides36437 | ACYL-MALONYL CONDENSING ENZYME-RELATED |
Paelopatides36438 | ACYL-MALONYL CONDENSING ENZYME-RELATED |
Paelopatides36439 | |
Paelopatides36440 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 35 |
Paelopatides36441 | NUMOD3 MOTIF FAMILY PROTEIN, EXPRESSED |
Paelopatides36442 | RHO FAMILY GTPASE |
Paelopatides36443 | RHO FAMILY GTPASE |
Paelopatides36444 | |
Paelopatides36445 | LSM1 |
Paelopatides36446 | SMALL NUCLEAR RIBONUCLEOPROTEIN F SNRNP-F |
Paelopatides36447 | IMIDAZOLONEPROPIONASE |
Paelopatides36448 | UNCHARACTERIZED |
Paelopatides36449 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides36450 | PROTEIN CBG26694 |
Paelopatides36451 | |
Paelopatides36452 | |
Paelopatides36453 | POL PROTEIN |
Paelopatides36454 | |
Paelopatides36455 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED |
Paelopatides36456 | PEPTIDOGLYCAN RECOGNITION PROTEIN |
Paelopatides36457 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides36458 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
Paelopatides36459 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides36460 | ZINC FINGER PROTEIN |
Paelopatides36461 | PROTEIN CBG26694 |
Paelopatides36462 | 5-HYDROXYTRYPTAMINE RECEPTOR |
Paelopatides36463 | |
Paelopatides36464 | |
Paelopatides36465 | SODIUM/POTASSIUM-TRANSPORTING ATPASE SUBUNIT ALPHA |